PRDM16 Vertebrate HGNC

Vertebrate Homology

Source

Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences select all deselect all Go
human	PRDM16	HGNC:14000 (HGNC) 63976 (Entrez Gene) 605557 (OMIM) PRDM16 (Alliance of Genome Resources)	Chr1 p36.32	Chr1:3069168-3438621 (+) GRCh38	dilated cardiomyopathy 1LL	Q9HAZ2 (UniProt \| EBI) NM_022114 (RefSeq)
mouse	Prdm16	MGI:1917923 (MGI) 70673 (Entrez Gene) Gene Tree Prdm16 (Alliance of Genome Resources)	Chr4 83.96 cM	Chr4:154400582-154721330 (-) GRCm39	left ventricular noncompaction	ENSMUSG00000039410 (Ensembl Gene Model) ENSMUSP00000101263 (Ensembl) ENSMUST00000105638 (Ensembl)
rat	Prdm16	RGD:2324431 (Rat Genome Database) 100366024 (Entrez Gene) Prdm16 (Alliance of Genome Resources)	Chr5			NP_001414232 (RefSeq) NM_001427303 (RefSeq)
zebrafish	prdm16	ZDB-GENE-080613-2 (Zebrafish Model Organism Database) 796720 (Entrez Gene) prdm16 (Alliance of Genome Resources)	Chr8			XP_009302551 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
- human
- mouse
- rat
- zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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