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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TXNIP HGNC:16952 (HGNC)
10628 (Entrez Gene)
606599 (OMIM)
TXNIP (Alliance of Genome Resources)
Chr1 q21.1 Chr1:145992435-145996579 (-)
GRCh38
Q9H3M7 (UniProt | EBI)
NM_006472 (RefSeq)
mouse Txnip MGI:1889549 (MGI)
56338 (Entrez Gene)
Gene Tree
Txnip (Alliance of Genome Resources)
Chr3 41.93 cM Chr3:96465273-96469173 (+)
GRCm39
hepatocellular carcinoma
Reye syndrome
56338 (NCBI Gene Model)
Q8BG60 (UniProt | EBI)
NM_001009935 (RefSeq)
rat Txnip RGD:620886 (Rat Genome Database)
117514 (Entrez Gene)
Txnip (Alliance of Genome Resources)
Chr2 q34 Q5M7W1 (UniProt | EBI)
NM_001008767 (RefSeq)
zebrafish txnipa ZDB-GENE-030804-10 (Zebrafish Model Organism Database)
368359 (Entrez Gene)
txnipa (Alliance of Genome Resources)
Chr19 NP_956381 (RefSeq)
NM_200087 (RefSeq)
txnipb ZDB-GENE-040917-1 (Zebrafish Model Organism Database)
448858 (Entrez Gene)
txnipb (Alliance of Genome Resources)
Chr16 NP_001239433 (RefSeq)
NM_001252504 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory