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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1229

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ALCAM HGNC:400 (HGNC)
214 (Entrez Gene)
601662 (OMIM)
Chr3 q13.1 Chr3:105366713-105576913 (+)
GRCh38
Q13740 (UniProt | EBI)
NM_001627 (RefSeq)
mouse Alcam MGI:1313266 (MGI)
11658 (Entrez Gene)
Gene Tree
VISTA-Point
Chr16 32.88 cM Chr16:52248996-52454074 (-)
GRCm38
OTTMUSG00000036124 (VEGA)
OTTMUSP00000051383 (VEGA)
OTTMUST00000092838 (VEGA)
rat Alcam 79559 (Entrez Gene)
Chr11 q21 O35112 (UniProt | EBI)
NM_031753 (RefSeq)
chimpanzee ALCAM 460565 (Entrez Gene)
Chr3 XP_516634 (RefSeq)
rhesus macaque ALCAM 703777 (Entrez Gene)
Chr2 NP_001244631 (RefSeq)
NM_001257702 (RefSeq)
cattle ALCAM 281614 (Entrez Gene)
Chr1 Q9BH13 (UniProt | EBI)
NM_174238 (RefSeq)
dog ALCAM 478550 (Entrez Gene)
Chr33 O46634 (UniProt | EBI)
chicken ALCAM 396092 (Entrez Gene)
Chr1 P42292 (UniProt | EBI)
NM_205179 (RefSeq)
western clawed frog alcam 780210 (Entrez Gene)
ChrUN NP_001072753 (RefSeq)
NM_001079285 (RefSeq)
zebrafish alcama 30194 (Entrez Gene)
Chr10 Q90460 (UniProt | EBI)
NM_131000 (RefSeq)
alcamb 323919 (Entrez Gene)
Chr15 NP_997799 (RefSeq)
NM_212634 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory