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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRAF5 HGNC:12035 (HGNC)
7188 (Entrez Gene)
602356 (OMIM)
TRAF5 (Alliance of Genome Resources)
Chr1 q32.3 Chr1:211326615-211374946 (+)
GRCh38
O00463 (UniProt | EBI)
NM_004619 (RefSeq)
mouse Traf5 MGI:107548 (MGI)
22033 (Entrez Gene)
Gene Tree
Traf5 (Alliance of Genome Resources)
Chr1 97.11 cM Chr1:191729166-191776868 (-)
GRCm39
ENSMUSG00000026637 (Ensembl Gene Model)
ENSMUSP00000141931 (Ensembl)
ENSMUST00000195815 (Ensembl)
rat Traf5 RGD:1593883 (Rat Genome Database)
684173 (Entrez Gene)
Traf5 (Alliance of Genome Resources)
Chr13 NP_001385630 (RefSeq)
NM_001398702 (RefSeq)
zebrafish traf5 ZDB-GENE-071120-3 (Zebrafish Model Organism Database)
563887 (Entrez Gene)
traf5 (Alliance of Genome Resources)
Chr22 XP_021325328 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory