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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTPRK HGNC:9674 (HGNC)
5796 (Entrez Gene)
602545 (OMIM)
PTPRK (MyGene.info)
HGNC homology
Chr6 q22.33 Chr6:127968779-128520847 (-)
Q15262 (UniProt | EBI)
NM_001135648 (RefSeq)
mouse Ptprk MGI:103310 (MGI)
19272 (Entrez Gene)
Gene Tree
HGNC homology
Chr10 15.06 cM Chr10:28074820-28597397 (+)
19272 (NCBI Gene Model)
P35822 (UniProt | EBI)
NM_001359355 (RefSeq)
rat Ptprk 360302 (Entrez Gene)
Chr1 p12 NP_001025073 (RefSeq)
NM_001029902 (RefSeq)
chimpanzee PTPRK 745734 (Entrez Gene)
Chr6 XP_009450246 (RefSeq)
cattle PTPRK 509657 (Entrez Gene)
Chr9 NP_001178466 (RefSeq)
NM_001191537 (RefSeq)
dog PTPRK 476290 (Entrez Gene)
Chr1 XP_022275633 (RefSeq)
chicken PTPRK 421711 (Entrez Gene)
Chr3 XP_025005166 (RefSeq)
zebrafish ptprk 555348 (Entrez Gene)
Chr20 XP_021324247 (RefSeq)
frog, western clawed ptprk 733477 (Entrez Gene)
Chr5 XP_031758184 (RefSeq)
macaque, rhesus PTPRK 711429 (Entrez Gene)
Chr4 XP_028702915 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory