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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXB1 HGNC:5111 (HGNC)
3211 (Entrez Gene)
142968 (OMIM)
HOXB1 (MyGene.info)
HOXB1 (Alliance of Genome Resources)
Chr17 q21.32 Chr17:48529445-48530910 (-)
GRCh38.p7
P14653 (UniProt | EBI)
NM_002144 (RefSeq)
mouse Hoxb1 MGI:96182 (MGI)
15407 (Entrez Gene)
Gene Tree
Hoxb1 (Alliance of Genome Resources)
Chr11 59.86 cM Chr11:96256578-96259082 (+)
GRCm39
ENSMUSG00000018973 (Ensembl Gene Model)
ENSMUSP00000019117 (Ensembl)
ENSMUST00000019117 (Ensembl)
rat Hoxb1 RGD:1310298 (Rat Genome Database)
303491 (Entrez Gene)
Hoxb1 (Alliance of Genome Resources)
Chr10 q26 XP_220896 (RefSeq)
zebrafish hoxb1a ZDB-GENE-990415-101 (Zebrafish Model Organism Database)
30337 (Entrez Gene)
hoxb1a (Alliance of Genome Resources)
Chr3 O42366 (UniProt | EBI)
NM_131115 (RefSeq)
hoxb1b ZDB-GENE-980526-290 (Zebrafish Model Organism Database)
30374 (Entrez Gene)
hoxb1b (Alliance of Genome Resources)
Chr12 Q90423 (UniProt | EBI)
NM_131142 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/23/2021
MGI 6.17
The Jackson Laboratory