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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7297

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human EBF1 HGNC:3126 (HGNC)
1879 (Entrez Gene)
164343 (OMIM)
EBF1 (MyGene.info)
HGNC homology
Chr5 q33.3 Chr5:158695915-159099762 (-)
GRCh38.p7
Q9UH73 (UniProt | EBI)
NM_001364159 (RefSeq)
mouse Ebf1 MGI:95275 (MGI)
13591 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 26.45 cM Chr11:44618100-45008096 (+)
GRCm38
lipodystrophy
13591 (NCBI Gene Model)
Q07802 (UniProt | EBI)
NM_001362575 (RefSeq)
rat Ebf1 116543 (Entrez Gene)
Chr10 q12 Q63398 (UniProt | EBI)
NM_053820 (RefSeq)
chimpanzee EBF1 462229 (Entrez Gene)
Chr5 XP_016809618 (RefSeq)
cattle EBF1 537712 (Entrez Gene)
Chr7 NP_001179845 (RefSeq)
NM_001192916 (RefSeq)
dog EBF1 479312 (Entrez Gene)
Chr4 XP_005619300 (RefSeq)
chicken EBF1 395512 (Entrez Gene)
Chr13 NP_990083 (RefSeq)
NM_204752 (RefSeq)
zebrafish ebf1a 565310 (Entrez Gene)
Chr14 A0A0R4IWI1 (UniProt | EBI)
frog, western clawed ebf4 100492234 (Entrez Gene)
Chr3 XP_004912822 (RefSeq)
macaque, rhesus EBF1 694086 (Entrez Gene)
Chr6 XP_014996819 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/22/2020
MGI 6.16
The Jackson Laboratory