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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CHRNA3 HGNC:1957 (HGNC)
1136 (Entrez Gene)
118503 (OMIM)
CHRNA3 (Alliance of Genome Resources)
Chr15 q25.1 Chr15:78593052-78621295 (-)
GRCh38
chronic obstructive pulmonary disease
lung adenocarcinoma
lung cancer
lung carcinoma
lung non-small cell carcinoma
lung small cell carcinoma
nicotine dependence
stomach cancer
P32297 (UniProt | EBI)
NM_001166694 (RefSeq)
mouse Chrna3 MGI:87887 (MGI)
110834 (Entrez Gene)
Gene Tree
Chrna3 (Alliance of Genome Resources)
Chr9 29.84 cM Chr9:54917401-54933846 (-)
GRCm39
110834 (NCBI Gene Model)
Q8R4G9 (UniProt | EBI)
NM_145129 (RefSeq)
rat Chrna3 RGD:2345 (Rat Genome Database)
25101 (Entrez Gene)
Chrna3 (Alliance of Genome Resources)
Chr8 q24 P04757 (UniProt | EBI)
NM_052805 (RefSeq)
zebrafish chrna3 ZDB-GENE-070822-1 (Zebrafish Model Organism Database)
568467 (Entrez Gene)
chrna3 (Alliance of Genome Resources)
Chr18 XP_001921314 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory