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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5168

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VCP HGNC:12666 (HGNC)
7415 (Entrez Gene)
601023 (OMIM)
Chr9 p13.3 Chr9:35056068-35072742 (-)
GRCh38
Amyotrophic Lateral Sclerosis 14, with or without Frontotemporal Dementia;
Inclusion Body Myopathy with Early-Onset Paget Disease with or without Frontotemporal Dementia 1; IBMPFD1
P55072 (UniProt | EBI)
NM_007126 (RefSeq)
mouse Vcp MGI:99919 (MGI)
269523 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 22.95 cM Chr4:42979963-43000507 (-)
GRCm38
Inclusion Body Myopathy with Early-Onset Paget Disease with or without Frontotemporal Dementia 1; IBMPFD1
OTTMUSG00000006688 (VEGA)
OTTMUSP00000007079 (VEGA)
OTTMUST00000015330 (VEGA)
rat Vcp 116643 (Entrez Gene)
Chr5 q22 P46462 (UniProt | EBI)
NM_053864 (RefSeq)
chimpanzee VCP 747490 (Entrez Gene)
Chr9 NP_001267410 (RefSeq)
NM_001280481 (RefSeq)
cattle VCP 507345 (Entrez Gene)
Chr8 Q3ZBT1 (UniProt | EBI)
NM_001034294 (RefSeq)
dog VCP 481590 (Entrez Gene)
Chr11 XP_852626 (RefSeq)
chicken VCP 427410 (Entrez Gene)
ChrZ NP_001038129 (RefSeq)
NM_001044664 (RefSeq)
western clawed frog vcp 448177 (Entrez Gene)
ChrUN Q6GL04 (UniProt | EBI)
NM_001005677 (RefSeq)
zebrafish vcp 327197 (Entrez Gene)
Chr5 Q7ZU99 (UniProt | EBI)
NM_201481 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory