Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes LMNB1
  • Mouse genes Lmnb1
  • Rat genes Lmnb1
  • Zfish genes lmnb1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Lmnb1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003690	double-stranded DNA binding	Lmnb1	IDA		Mouse	PMID:29484800
Molecular Function	GO:0043274	phospholipase binding	Lmnb1	IPI	UniProtKB:Q9Z1B3	Mouse	MGI:MGI:4943663|PMID:19028838
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P02545-1	Human	PMID:21346760
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P02545	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q05322	Human	PMID:25158218
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P52294	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P02545-1	Human	PMID:26524528
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q03252	Human	PMID:26524528
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q9GZQ8	Human	PMID:26524528
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P02545	Human	PMID:29568061
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P02545	Human	PMID:29997244
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P02545	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q03252	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P02545-2	Human	PMID:31467278
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:A6NC98	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:O15131	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:O60684	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:O95295	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P52294	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q03252	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q05BL1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q7KZS0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q8TC57	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q8WWB5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q96KQ4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q9H3R5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q9NPF5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:Q9Y6X4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	LMNB1	IPI	UniProtKB:P02545	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Lmnb1	IPI	RGD:3410	Rat	PMID:21277044|RGD:10044248
Molecular Function	GO:0005515	protein binding	Lmnb1	IPI	RGD:2507	Rat	PMID:21886794|RGD:10044244
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	Lmnb1	IDA		Mouse	PMID:23117660
Cellular Component	GO:0005737	cytoplasm	Lmnb1	IDA		Rat	PMID:21389115|RGD:10044247
Cellular Component	GO:0005638	lamin filament	Lmnb1	IDA		Mouse	PMID:8032679
Cellular Component	GO:0016020	membrane	LMNB1	HDA		Human	PMID:19946888
Cellular Component	GO:0005635	nuclear envelope	LMNB1	IDA		Human	PMID:21610090
Cellular Component	GO:0005635	nuclear envelope	Lmnb1	IDA		Mouse	MGI:MGI:5470327|PMID:23166514
Cellular Component	GO:0005635	nuclear envelope	Lmnb1	IDA		Mouse	MGI:MGI:4943663|PMID:19028838
Cellular Component	GO:0005635	nuclear envelope	Lmnb1	IDA		Mouse	PMID:20457914
Cellular Component	GO:0005635	nuclear envelope	Lmnb1	IDA		Mouse	PMID:16364897
Cellular Component	GO:0005635	nuclear envelope	Lmnb1	IDA		Rat	PMID:20204270|RGD:10044249
Cellular Component	GO:0005637	nuclear inner membrane	Lmnb1	IDA		Mouse	PMID:25123547
Cellular Component	GO:0005652	nuclear lamina	LMNB1	IMP		Human	PMID:32910914
Cellular Component	GO:0005652	nuclear lamina	Lmnb1	IDA		Rat	PMID:16950509|RGD:10044252
Cellular Component	GO:0016363	nuclear matrix	Lmnb1	IDA		Mouse	PMID:20153721
Cellular Component	GO:0016363	nuclear matrix	Lmnb1	IDA		Rat	PMID:12243746|RGD:1598684
Cellular Component	GO:0031965	nuclear membrane	LMNB1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031965	nuclear membrane	LMNB1	HDA		Human	PMID:16791210
Cellular Component	GO:0031965	nuclear membrane	Lmnb1	IDA		Rat	PMID:16575512|RGD:10044255
Cellular Component	GO:0034399	nuclear periphery	Lmnb1	IDA		Mouse	PMID:28811369
Cellular Component	GO:0005654	nucleoplasm	Lmnb1	IDA		Mouse	MGI:MGI:4943663|PMID:19028838
Cellular Component	GO:0005634	nucleus	LMNB1	IDA		Human	PMID:10791971
Cellular Component	GO:0005634	nucleus	Lmnb1	IDA		Mouse	PMID:21503901
Cellular Component	GO:0005634	nucleus	Lmnb1	IDA		Mouse	PMID:23028340
Cellular Component	GO:0005634	nucleus	Lmnb1	IDA		Mouse	PMID:12714744
Cellular Component	GO:0005634	nucleus	Lmnb1	IDA		Mouse	PMID:21874024
Cellular Component	GO:0005634	nucleus	Lmnb1	IDA		Rat	PMID:21842415|RGD:10044245
Biological Process	GO:0006915	apoptotic process	Lmnb1	IEP		Rat	PMID:20204270|RGD:10044249
Biological Process	GO:0071386	cellular response to corticosterone stimulus	Lmnb1	IEP		Rat	PMID:15755911|RGD:2312627
Biological Process	GO:1905232	cellular response to L-glutamate	Lmnb1	IDA		Rat	PMID:21389115|RGD:10044247
Biological Process	GO:0071407	cellular response to organic cyclic compound	Lmnb1	IEP		Rat	PMID:16548065|RGD:10045607
Biological Process	GO:0022008	neurogenesis	Lmnb1	IEP		Rat	PMID:17432957|RGD:10044251
Biological Process	GO:0006998	nuclear envelope organization	LMNB1	IMP		Human	PMID:32910914
Biological Process	GO:0046677	response to antibiotic	Lmnb1	IEP		Rat	PMID:18500788|RGD:10045612
Biological Process	GO:0009410	response to xenobiotic stimulus	Lmnb1	IEP		Rat	PMID:24780913|RGD:10045608

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern