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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
9192

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SETBP1 HGNC:15573 (HGNC)
26040 (Entrez Gene)
611060 (OMIM)
Chr18 q21.1 Chr18:44680173-45068510 (+)
GRCh38
Schinzel-Giedion Midface Retraction Syndrome
Q9Y6X0 (UniProt | EBI)
NM_015559 (RefSeq)
mouse Setbp1 MGI:1933199 (MGI)
240427 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 52.67 cM Chr18:78750380-79109391 (-)
GRCm38
OTTMUSG00000017269 (VEGA)
OTTMUSP00000018796 (VEGA)
OTTMUST00000041809 (VEGA)
rat Setbp1 291423 (Entrez Gene)
Chr18 q12.3 XP_006222704 (RefSeq)
chimpanzee SETBP1 455390 (Entrez Gene)
Chr18 XP_512106 (RefSeq)
rhesus macaque SETBP1 699652 (Entrez Gene)
Chr18 XP_002808207 (RefSeq)
cattle SETBP1 617265 (Entrez Gene)
Chr24 XP_003584029 (RefSeq)
NM_001102310 (RefSeq)
dog SETBP1 490472 (Entrez Gene)
Chr7 XP_547594 (RefSeq)
chicken SETBP1 416376 (Entrez Gene)
ChrZ XP_001233854 (RefSeq)
zebrafish setbp1 796785 (Entrez Gene)
Chr5 XP_005165732 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory