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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
80191

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human STX3 HGNC:11438 (HGNC)
6809 (Entrez Gene)
600876 (OMIM)
Chr11 q12.1 Chr11:59755006-59805882 (+)
GRCh38
Q13277 (UniProt | EBI)
NM_004177 (RefSeq)
mouse Stx3 MGI:103077 (MGI)
20908 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 8.52 cM Chr19:11775119-11819403 (-)
GRCm38
ENSMUSG00000041488 (Ensembl Gene Model)
ENSMUSP00000069529 (Ensembl)
ENSMUST00000069285 (Ensembl)
rat Stx3 81802 (Entrez Gene)
Chr1 q43 Q08849 (UniProt | EBI)
NM_031124 (RefSeq)
chimpanzee STX3 466619 (Entrez Gene)
Chr11 XP_001135446 (RefSeq)
rhesus macaque LOC698953 698953 (Entrez Gene)
Chr14 XP_001089614 (RefSeq)
cattle STX3 513275 (Entrez Gene)
Chr15 NP_001095441 (RefSeq)
NM_001101971 (RefSeq)
dog STX3 100855648 (Entrez Gene)
Chr21 XP_005633873 (RefSeq)
chicken STX3 428839 (Entrez Gene)
Chr5 XP_003641322 (RefSeq)
zebrafish stx3a 393515 (Entrez Gene)
Chr14 NP_956837 (RefSeq)
NM_200543 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory