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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7766

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXA9 HGNC:5109 (HGNC)
3205 (Entrez Gene)
142956 (OMIM)
Chr7 p15.2 Chr7:27162438-27165530 (-)
GRCh38
P31269 (UniProt | EBI)
NM_152739 (RefSeq)
mouse Hoxa9 MGI:96180 (MGI)
15405 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 25.4 cM Chr6:52223100-52231089 (-)
GRCm38
OTTMUSG00000018873 (VEGA)
OTTMUSP00000020422 (VEGA)
OTTMUST00000045395 (VEGA)
rat Hoxa9l 297099 (Entrez Gene)
Chr4 q24 XP_003752231 (RefSeq)
LOC100909740 100909740 (Entrez Gene)
Chr4 XP_003749806 (RefSeq)
LOC100911710 100911710 (Entrez Gene)
Chr4
chimpanzee HOXA9 745701 (Entrez Gene)
Chr7 XP_001162954 (RefSeq)
rhesus macaque HOXA9 699729 (Entrez Gene)
Chr3 XP_001091402 (RefSeq)
cattle HOXA9 510459 (Entrez Gene)
Chr4 NP_001099087 (RefSeq)
NM_001105617 (RefSeq)
dog HOXA9 482372 (Entrez Gene)
Chr14 XP_539489 (RefSeq)
chicken HOXA9 396096 (Entrez Gene)
Chr2 Q98924 (UniProt | EBI)
LOC100858551 100858551 (Entrez Gene)
Chr2 XP_003640751 (RefSeq)
LOC100858870 100858870 (Entrez Gene)
Chr2 XP_003640754 (RefSeq)
western clawed frog hoxa9 101733969 (Entrez Gene)
ChrUN XP_004915453 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory