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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXA9 HGNC:5109 (HGNC)
3205 (Entrez Gene)
142956 (OMIM)
HOXA9 (MyGene.info)
HGNC homology
Chr7 p15.2 Chr7:27162438-27165530 (-)
P31269 (UniProt | EBI)
NM_152739 (RefSeq)
mouse Hoxa9 MGI:96180 (MGI)
15405 (Entrez Gene)
Gene Tree
HGNC homology
Chr6 25.4 cM Chr6:52223100-52231089 (-)
OTTMUSG00000018873 (VEGA)
OTTMUSP00000020422 (VEGA)
OTTMUST00000045395 (VEGA)
rat Hoxa9 297099 (Entrez Gene)
Chr4 q24 XP_017457951 (RefSeq)
LOC100909740 100909740 (Entrez Gene)
LOC100911710 100911710 (Entrez Gene)
chimpanzee HOXA9 745701 (Entrez Gene)
Chr7 XP_001162954 (RefSeq)
cattle HOXA9 510459 (Entrez Gene)
Chr4 NP_001099087 (RefSeq)
NM_001105617 (RefSeq)
dog HOXA9 482372 (Entrez Gene)
Chr14 XP_539489 (RefSeq)
chicken HOXA9 396096 (Entrez Gene)
Chr2 Q98924 (UniProt | EBI)
NM_001305224 (RefSeq)
LOC100858551 100858551 (Entrez Gene)
LOC100858870 100858870 (Entrez Gene)
frog, western clawed hoxa9 101733969 (Entrez Gene)
macaque, rhesus HOXA9 699729 (Entrez Gene)
Chr3 XP_001091402 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory