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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7254

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CASP2 HGNC:1503 (HGNC)
835 (Entrez Gene)
600639 (OMIM)
Chr7 q34-q35 Chr7:143288215-143307696 (+)
GRCh38
P42575 (UniProt | EBI)
NM_032982 (RefSeq)
mouse Casp2 MGI:97295 (MGI)
12366 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 20.54 cM Chr6:42264985-42282508 (+)
GRCm38
OTTMUSG00000023653 (VEGA)
OTTMUSP00000027875 (VEGA)
OTTMUST00000057721 (VEGA)
rat Casp2 64314 (Entrez Gene)
Chr4 q23 P55215 (UniProt | EBI)
NM_022522 (RefSeq)
chimpanzee CASP2 463804 (Entrez Gene)
Chr7 XP_519448 (RefSeq)
cattle CASP2 531419 (Entrez Gene)
Chr4 NP_001137576 (RefSeq)
NM_001144104 (RefSeq)
dog CASP2 482737 (Entrez Gene)
Chr16 NP_001182080 (RefSeq)
NM_001195151 (RefSeq)
chicken CASP2 395857 (Entrez Gene)
Chr1 Q98943 (UniProt | EBI)
NM_001167701 (RefSeq)
western clawed frog LOC100486813 100486813 (Entrez Gene)
ChrUN XP_002941266 (RefSeq)
zebrafish casp2 373118 (Entrez Gene)
Chr16 NP_001036160 (RefSeq)
NM_001042695 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory