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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68320

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SYN3 HGNC:11496 (HGNC)
8224 (Entrez Gene)
602705 (OMIM)
Chr22 q12.3 Chr22:32512552-33058391 (-)
GRCh38
O14994 (UniProt | EBI)
NM_003490 (RefSeq)
mouse Syn3 MGI:1351334 (MGI)
27204 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 41.95 cM Chr10:86055125-86498896 (-)
GRCm38
Autism
OTTMUSG00000028681 (VEGA)
OTTMUSP00000036313 (VEGA)
OTTMUST00000071040 (VEGA)
rat Syn3 29130 (Entrez Gene)
Chr7 q13 O70441 (UniProt | EBI)
NM_017109 (RefSeq)
chimpanzee SYN3 458783 (Entrez Gene)
Chr22 XP_515096 (RefSeq)
rhesus macaque SYN3 100430213 (Entrez Gene)
Chr10 NP_001181680 (RefSeq)
NM_001194751 (RefSeq)
cattle SYN3 100138309 (Entrez Gene)
Chr5 NP_001178286 (RefSeq)
NM_001191357 (RefSeq)
dog SYN3 481290 (Entrez Gene)
Chr10 XP_538411 (RefSeq)
chicken SYN3 100857420 (Entrez Gene)
Chr1 XP_003640437 (RefSeq)
western clawed frog syn3 100170548 (Entrez Gene)
ChrUN NP_001123797 (RefSeq)
NM_001130325 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory