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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
68168

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NKX3-2 HGNC:951 (HGNC)
579 (Entrez Gene)
602183 (OMIM)
Chr4 p16.3 Chr4:13540830-13544490 (-)
GRCh38
Spondylo-Megaepiphyseal-Metaphyseal Dysplasia; SMMD
P78367 (UniProt | EBI)
NM_001189 (RefSeq)
mouse Nkx3-2 MGI:108015 (MGI)
12020 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 22.58 cM Chr5:41761483-41764501 (-)
GRCm38
OTTMUSG00000036567 (VEGA)
OTTMUSP00000052105 (VEGA)
OTTMUST00000093782 (VEGA)
chimpanzee NKX3-2 471145 (Entrez Gene)
Chr4 XP_003954418 (RefSeq)
rhesus macaque NKX3-2 713627 (Entrez Gene)
Chr5 NP_001181040 (RefSeq)
NM_001194111 (RefSeq)
cattle NKX3-2 616907 (Entrez Gene)
Chr6 NP_001180062 (RefSeq)
NM_001193133 (RefSeq)
dog NKX3-2 488822 (Entrez Gene)
Chr3 XP_545940 (RefSeq)
western clawed frog nkx3-2 100497965 (Entrez Gene)
ChrUN XP_002940787 (RefSeq)
zebrafish nkx3.2 337865 (Entrez Gene)
Chr14 NP_835233 (RefSeq)
NM_178132 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory