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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
65049

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PM20D1 HGNC:26518 (HGNC)
148811 (Entrez Gene)
617124 (OMIM)
HGNC homology
Chr1 q32.1 Chr1:205813811-205850148 (-)
GRCh38.p7
Q6GTS8 (UniProt | EBI)
NM_152491 (RefSeq)
mouse Pm20d1 MGI:2442939 (MGI)
212933 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr1 57.19 cM Chr1:131797384-131821419 (+)
GRCm38
212933 (NCBI Gene Model)
Q8C165 (UniProt | EBI)
NM_178079 (RefSeq)
rat Pm20d1 498226 (Entrez Gene)
Chr13 q13 NP_001102538 (RefSeq)
NM_001109068 (RefSeq)
chimpanzee PM20D1 457674 (Entrez Gene)
Chr1 XP_514142 (RefSeq)
cattle PM20D1 513852 (Entrez Gene)
Chr16 Q2T9M7 (UniProt | EBI)
NM_001038100 (RefSeq)
chicken PM20D1 419838 (Entrez Gene)
Chr26 Q5ZL18 (UniProt | EBI)
NM_001030915 (RefSeq)
zebrafish pm20d1.1 553216 (Entrez Gene)
Chr23 Q32LT9 (UniProt | EBI)
NM_001037371 (RefSeq)
pm20d1.2 768158 (Entrez Gene)
Chr23 Q08BB2 (UniProt | EBI)
NM_001077301 (RefSeq)
frog, western clawed pm20d1 100145660 (Entrez Gene)
Chr2 Q08BT9 (UniProt | EBI)
NM_001127051 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/12/2019
MGI 6.13
The Jackson Laboratory