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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
56856

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TBC1D1 HGNC:11578 (HGNC)
23216 (Entrez Gene)
609850 (OMIM)
TBC1D1 (MyGene.info)
HGNC homology
Chr4 p14 Chr4:37891084-38139175 (+)
GRCh38.p7
Q86TI0 (UniProt | EBI)
NM_001253912 (RefSeq)
mouse Tbc1d1 MGI:1889508 (MGI)
57915 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 32.8 cM Chr5:64156305-64351486 (+)
GRCm38
OTTMUSG00000026476 (VEGA)
OTTMUSP00000032630 (VEGA)
OTTMUST00000065459 (VEGA)
rat Tbc1d1 360937 (Entrez Gene)
Chr14 p11 XP_006221813 (RefSeq)
chimpanzee TBC1D1 461163 (Entrez Gene)
Chr4 XP_016806932 (RefSeq)
cattle TBC1D1 282704 (Entrez Gene)
Chr6 O97790 (UniProt | EBI)
NM_001166524 (RefSeq)
dog TBC1D1 479115 (Entrez Gene)
Chr3 XP_022272957 (RefSeq)
chicken TBC1D1 426162 (Entrez Gene)
Chr4 NP_001254502 (RefSeq)
NM_001267573 (RefSeq)
zebrafish tbc1d1 561193 (Entrez Gene)
Chr1 XP_021331925 (RefSeq)
frog, western clawed tbc1d1 733547 (Entrez Gene)
Chr1 XP_004910990 (RefSeq)
macaque, rhesus TBC1D1 697357 (Entrez Gene)
Chr5 NP_001244994 (RefSeq)
NM_001258065 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/09/2018
MGI 6.12
The Jackson Laboratory