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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55569

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CHI3L1 HGNC:1932 (HGNC)
1116 (Entrez Gene)
601525 (OMIM)
Chr1 q32.1 Chr1:203178931-203186794 (-)
GRCh38
Asthma-Related Traits, Susceptibility to, 7; ASRT7
Schizophrenia; SCZD
P36222 (UniProt | EBI)
NM_001276 (RefSeq)
mouse Chil1 MGI:1340899 (MGI)
12654 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 58.15 cM Chr1:134182176-134190181 (+)
GRCm38
OTTMUSG00000030091 (VEGA)
OTTMUSP00000038876 (VEGA)
OTTMUST00000074544 (VEGA)
rat Chi3l1 89824 (Entrez Gene)
Chr13 q13 Q9WTV1 (UniProt | EBI)
NM_053560 (RefSeq)
chimpanzee CHI3L1 457640 (Entrez Gene)
Chr1 XP_001153636 (RefSeq)
rhesus macaque CHI3L1 703401 (Entrez Gene)
Chr1 NP_001252849 (RefSeq)
NM_001265920 (RefSeq)
cattle CHI3L1 286869 (Entrez Gene)
Chr16 P30922 (UniProt | EBI)
NM_001080219 (RefSeq)
dog CHI3L1 490222 (Entrez Gene)
Chr7 NP_001171278 (RefSeq)
NM_001177807 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory