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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
55509

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TPM2 HGNC:12011 (HGNC)
7169 (Entrez Gene)
190990 (OMIM)
Chr9 p13 Chr9:35681993-35690056 (-)
GRCh38
Arthrogryposis, Distal, Type 1A; DA1A
Arthrogryposis, Distal, Type 2B; DA2B
Myopathy, Congenital, with Fiber-Type Disproportion; CFTD
Nemaline Myopathy 4; NEM4
P07951 (UniProt | EBI)
NM_003289 (RefSeq)
mouse Tpm2 MGI:98810 (MGI)
22004 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 23.05 cM Chr4:43514711-43523765 (-)
GRCm38
OTTMUSG00000006959 (VEGA)
OTTMUSP00000007392 (VEGA)
OTTMUST00000016117 (VEGA)
rat Tpm2 500450 (Entrez Gene)
Chr5 q22 P58775 (UniProt | EBI)
NM_001024345 (RefSeq)
chimpanzee TPM2 465078 (Entrez Gene)
Chr9 XP_001167124 (RefSeq)
rhesus macaque TPM2 696604 (Entrez Gene)
Chr15 XP_001086852 (RefSeq)
cattle TPM2 497015 (Entrez Gene)
Chr8 Q5KR48 (UniProt | EBI)
NM_001010995 (RefSeq)
dog TPM2 481598 (Entrez Gene)
Chr11 XP_538720 (RefSeq)
zebrafish tpm2 415209 (Entrez Gene)
Chr10 NP_001002119 (RefSeq)
NM_001002119 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory