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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
55466

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL10A1 HGNC:2185 (HGNC)
1300 (Entrez Gene)
120110 (OMIM)
Chr6 q21-q22 Chr6:116118909-116158989 (-)
GRCh38
Metaphyseal Chondrodysplasia, Schmid Type; MCDS
Q03692 (UniProt | EBI)
NM_000493 (RefSeq)
mouse Col10a1 MGI:88445 (MGI)
12813 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 18.85 cM Chr10:34389981-34397085 (+)
GRCm38
Metaphyseal Chondrodysplasia, Schmid Type; MCDS
OTTMUSG00000022505 (VEGA)
OTTMUSP00000025645 (VEGA)
OTTMUST00000053879 (VEGA)
chimpanzee COL10A1 742603 (Entrez Gene)
Chr6 XP_001161595 (RefSeq)
rhesus macaque COL10A1 716223 (Entrez Gene)
Chr4 NP_001181475 (RefSeq)
NM_001194546 (RefSeq)
cattle COL10A1 282416 (Entrez Gene)
Chr9 P23206 (UniProt | EBI)
NM_174634 (RefSeq)
dog COL10A1 100856711 (Entrez Gene)
Chr12 XP_003639449 (RefSeq)
chicken LOC100858979 100858979 (Entrez Gene)
Chr3 XP_003641055 (RefSeq)
zebrafish col10a1a 558919 (Entrez Gene)
Chr17 NP_001077296 (RefSeq)
NM_001083827 (RefSeq)
col10a1b 555804 (Entrez Gene)
Chr20 XP_683515 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory