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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL10A1 HGNC:2185 (HGNC)
1300 (Entrez Gene)
120110 (OMIM)
HGNC homology
Chr6 q22.1 Chr6:116118909-116218698 (-)
Schmid metaphyseal chondrodysplasia
Q03692 (UniProt | EBI)
NM_000493 (RefSeq)
mouse Col10a1 MGI:88445 (MGI)
12813 (Entrez Gene)
Gene Tree
HGNC homology
Chr10 18.85 cM Chr10:34389981-34397085 (+)
Schmid metaphyseal chondrodysplasia
OTTMUSG00000022505 (VEGA)
OTTMUSP00000025645 (VEGA)
OTTMUST00000053879 (VEGA)
chimpanzee COL10A1 742603 (Entrez Gene)
Chr6 XP_001161595 (RefSeq)
cattle COL10A1 282416 (Entrez Gene)
Chr9 P23206 (UniProt | EBI)
NM_174634 (RefSeq)
dog COL10A1 100856711 (Entrez Gene)
Chr12 XP_003639449 (RefSeq)
chicken COL10A1 100858979 (Entrez Gene)
Chr3 P08125 (UniProt | EBI)
zebrafish col10a1a 558919 (Entrez Gene)
Chr17 NP_001077296 (RefSeq)
NM_001083827 (RefSeq)
col10a1b 555804 (Entrez Gene)
Chr20 XP_683515 (RefSeq)
macaque, rhesus COL10A1 716223 (Entrez Gene)
Chr4 NP_001181475 (RefSeq)
NM_001194546 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.10
The Jackson Laboratory