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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
5154

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SSR3 HGNC:11325 (HGNC)
6747 (Entrez Gene)
606213 (OMIM)
HGNC homology
Chr3 q25.31 Chr3:156539553-156555200 (-)
GRCh38.p7
Q9UNL2 (UniProt | EBI)
NM_001308204 (RefSeq)
mouse Ssr3 MGI:1914687 (MGI)
67437 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 30.15 cM Chr3:65379657-65392553 (-)
GRCm38
67437 (NCBI Gene Model)
Q9DCF9 (UniProt | EBI)
NM_026155 (RefSeq)
rat Ssr3 81784 (Entrez Gene)
Chr2 q31 Q08013 (UniProt | EBI)
NM_031120 (RefSeq)
chimpanzee SSR3 460799 (Entrez Gene)
Chr3 XP_516834 (RefSeq)
cattle SSR3 767980 (Entrez Gene)
Chr1 Q3SZ87 (UniProt | EBI)
NM_001077044 (RefSeq)
dog SSR3 477124 (Entrez Gene)
Chr23 XP_534317 (RefSeq)
chicken SSR3 425027 (Entrez Gene)
Chr9 NP_001264404 (RefSeq)
NM_001277475 (RefSeq)
zebrafish LOC100535344 100535344 (Entrez Gene)
Chr18
ssr3 337190 (Entrez Gene)
Chr18 NP_956347 (RefSeq)
NM_200053 (RefSeq)
frog, western clawed ssr3 448655 (Entrez Gene)
Chr5 NP_001005080 (RefSeq)
NM_001005080 (RefSeq)
macaque, rhesus SSR3 706518 (Entrez Gene)
Chr2 NP_001253473 (RefSeq)
NM_001266544 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory