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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4833

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VAMP5 HGNC:12646 (HGNC)
10791 (Entrez Gene)
607029 (OMIM)
HGNC homology
Chr2 p11.2 Chr2:85584408-85593388 (+)
GRCh38.p7
O95183 (UniProt | EBI)
NM_006634 (RefSeq)
mouse Vamp5 MGI:1858622 (MGI)
53620 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 32.27 cM Chr6:72368794-72380468 (-)
GRCm38
ENSMUSG00000073002 (Ensembl Gene Model)
ENSMUSP00000098843 (Ensembl)
ENSMUST00000101285 (Ensembl)
rat Vamp5 89818 (Entrez Gene)
Chr4 q31 Q9Z2J5 (UniProt | EBI)
NM_053555 (RefSeq)
chimpanzee VAMP5 470422 (Entrez Gene)
Chr2A XP_525803 (RefSeq)
cattle VAMP5 540406 (Entrez Gene)
Chr11 Q2KHY2 (UniProt | EBI)
NM_001046476 (RefSeq)
dog VAMP5 482823 (Entrez Gene)
Chr17 XP_539938 (RefSeq)
macaque, rhesus VAMP5 695471 (Entrez Gene)
Chr13 NP_001252917 (RefSeq)
NM_001265988 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory