About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
37911

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human CALR HGNC:1455 (HGNC)
811 (Entrez Gene)
109091 (OMIM)
Chr19 p13.3-p13.2 Chr19:12938600-12944490 (+)
GRCh38
Myelofibrosis
Thrombocythemia 1; THCYT1
P27797 (UniProt | EBI)
NM_004343 (RefSeq)
mouse Calr MGI:88252 (MGI)
12317 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 41.21 cM Chr8:84841850-84846934 (-)
GRCm38
OTTMUSG00000022277 (VEGA)
OTTMUSP00000025211 (VEGA)
OTTMUST00000053061 (VEGA)
rat Calr 64202 (Entrez Gene)
Chr19 q11 P18418 (UniProt | EBI)
NM_022399 (RefSeq)
chimpanzee CALR 455756 (Entrez Gene)
Chr19 XP_003316194 (RefSeq)
rhesus macaque CALR 716910 (Entrez Gene)
Chr19 NP_001248060 (RefSeq)
NM_001261131 (RefSeq)
cattle CALR 281036 (Entrez Gene)
Chr7 P52193 (UniProt | EBI)
NM_174000 (RefSeq)
dog CALR 476694 (Entrez Gene)
Chr20 XP_867310 (RefSeq)
chicken CALR3 420146 (Entrez Gene)
Chr28 XP_418262 (RefSeq)
western clawed frog calr 407962 (Entrez Gene)
ChrUN NP_001001253 (RefSeq)
NM_001001253 (RefSeq)
zebrafish calrl2 325317 (Entrez Gene)
Chr8 NP_956007 (RefSeq)
NM_199713 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/08/2014
MGI 5.20
The Jackson Laboratory