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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
335

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TPP1 HGNC:2073 (HGNC)
1200 (Entrez Gene)
607998 (OMIM)
Chr11 p15 Chr11:6612766-6619461 (-)
GRCh38
Ceroid Lipofuscinosis, Neuronal, 2; CLN2
O14773 (UniProt | EBI)
NM_000391 (RefSeq)
mouse Tpp1 MGI:1336194 (MGI)
12751 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 55.97 cM Chr7:105744847-105752207 (-)
GRCm38
Ceroid Lipofuscinosis, Neuronal, 2; CLN2
12751 (NCBI Gene Model)
O89023 (UniProt | EBI)
NM_009906 (RefSeq)
rat Tpp1 83534 (Entrez Gene)
Chr1 q33 Q9EQV6 (UniProt | EBI)
NM_031357 (RefSeq)
chimpanzee TPP1 450999 (Entrez Gene)
Chr11 Q5IS74 (UniProt | EBI)
NM_001013007 (RefSeq)
rhesus macaque LOC709838 709838 (Entrez Gene)
Chr14 XP_001108748 (RefSeq)
cattle TPP1 515575 (Entrez Gene)
Chr15 Q0V8B6 (UniProt | EBI)
NM_001075718 (RefSeq)
dog TPP1 485337 (Entrez Gene)
Chr21 Q9XSB8 (UniProt | EBI)
NM_001013847 (RefSeq)
chicken TPP1 425576 (Entrez Gene)
Chr1 XP_423326 (RefSeq)
western clawed frog tpp1 100124868 (Entrez Gene)
ChrUN NP_001096294 (RefSeq)
NM_001102824 (RefSeq)
zebrafish tpp1 798347 (Entrez Gene)
Chr17 NP_001122270 (RefSeq)
NM_001128798 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory