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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32672

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PINK1 HGNC:14581 (HGNC)
65018 (Entrez Gene)
608309 (OMIM)
Chr1 p36 Chr1:20633455-20651511 (+)
GRCh38
Parkinson Disease 6, Autosomal Recessive Early-Onset; PARK6
Q9BXM7 (UniProt | EBI)
NM_032409 (RefSeq)
mouse Pink1 MGI:1916193 (MGI)
68943 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 70.14 cM Chr4:138313409-138326307 (-)
GRCm38
Parkinson Disease 6, Autosomal Recessive Early-Onset; PARK6
OTTMUSG00000009975 (VEGA)
OTTMUSP00000010580 (VEGA)
OTTMUST00000023184 (VEGA)
rat Pink1 298575 (Entrez Gene)
Chr5 q36 NP_001100164 (RefSeq)
NM_001106694 (RefSeq)
chimpanzee PINK1 749028 (Entrez Gene)
Chr1 XP_001164912 (RefSeq)
rhesus macaque LOC698013 698013 (Entrez Gene)
ChrX XP_001086194 (RefSeq)
PINK1 706037 (Entrez Gene)
Chr1 XP_001096848 (RefSeq)
cattle PINK1 510683 (Entrez Gene)
Chr2 NP_001093171 (RefSeq)
NM_001099701 (RefSeq)
dog PINK1 100688445 (Entrez Gene)
Chr2 XP_005617989 (RefSeq)
chicken PINK1 425370 (Entrez Gene)
Chr21 XP_423139 (RefSeq)
zebrafish pink1 494085 (Entrez Gene)
Chr23 NP_001008628 (RefSeq)
NM_001008628 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory