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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32523

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GAN HGNC:4137 (HGNC)
8139 (Entrez Gene)
605379 (OMIM)
Chr16 q24.1 Chr16:81314966-81380198 (+)
GRCh38
Giant Axonal Neuropathy 1, Autosomal Recessive; GAN1
Q9H2C0 (UniProt | EBI)
NM_022041 (RefSeq)
mouse Gan MGI:1890619 (MGI)
209239 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 63.71 cM Chr8:117158137-117205834 (+)
GRCm38
Giant Axonal Neuropathy 1, Autosomal Recessive; GAN1
OTTMUSG00000033779 (VEGA)
OTTMUSP00000045937 (VEGA)
OTTMUST00000085106 (VEGA)
rat Gan 307893 (Entrez Gene)
Chr19 q12 NP_001100904 (RefSeq)
NM_001107434 (RefSeq)
chimpanzee GAN 468044 (Entrez Gene)
Chr16 XP_001142931 (RefSeq)
rhesus macaque GAN 713996 (Entrez Gene)
Chr20 XP_001111517 (RefSeq)
cattle GAN 521175 (Entrez Gene)
Chr18 NP_001092485 (RefSeq)
NM_001099015 (RefSeq)
dog GAN 489694 (Entrez Gene)
Chr5 XP_546814 (RefSeq)
chicken GAN 430553 (Entrez Gene)
Chr11 XP_428110 (RefSeq)
zebrafish LOC100537435 100537435 (Entrez Gene)
Chr18 XP_003200482 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory