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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
32249

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SATB2 HGNC:21637 (HGNC)
23314 (Entrez Gene)
608148 (OMIM)
Chr2 q33 Chr2:199269500-199471266 (-)
GRCh38
Glass Syndrome
Q9UPW6 (UniProt | EBI)
NM_015265 (RefSeq)
mouse Satb2 MGI:2679336 (MGI)
212712 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 28.72 cM Chr1:56793986-56978650 (-)
GRCm38
OTTMUSG00000023028 (VEGA)
OTTMUSP00000026565 (VEGA)
OTTMUST00000055482 (VEGA)
rat Satb2 501145 (Entrez Gene)
Chr9 q31 NP_001102776 (RefSeq)
NM_001109306 (RefSeq)
chimpanzee SATB2 459856 (Entrez Gene)
Chr2B XP_516012 (RefSeq)
rhesus macaque SATB2 699151 (Entrez Gene)
Chr12 XP_001087625 (RefSeq)
cattle SATB2 541192 (Entrez Gene)
Chr2 NP_001192999 (RefSeq)
NM_001206070 (RefSeq)
dog SATB2 100687238 (Entrez Gene)
Chr37 XP_005640560 (RefSeq)
chicken SATB2 424063 (Entrez Gene)
Chr7 NP_001186039 (RefSeq)
NM_001199110 (RefSeq)
zebrafish satb2 563435 (Entrez Gene)
Chr9 NP_001122004 (RefSeq)
NM_001128532 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory