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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
3079

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SREBF1 HGNC:11289 (HGNC)
6720 (Entrez Gene)
184756 (OMIM)
Chr17 p11.2 Chr17:17811349-17837017 (-)
GRCh38
P36956 (UniProt | EBI)
NM_001005291 (RefSeq)
mouse Srebf1 MGI:107606 (MGI)
20787 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 37.81 cM Chr11:60199089-60222581 (-)
GRCm38
OTTMUSG00000005809 (VEGA)
OTTMUSP00000005985 (VEGA)
OTTMUST00000012870 (VEGA)
rat Srebf1 78968 (Entrez Gene)
Chr10 q22 P56720 (UniProt | EBI)
NM_001276707 (RefSeq)
chimpanzee SREBF1 454480 (Entrez Gene)
Chr17 XP_003315641 (RefSeq)
rhesus macaque SREBF1 706972 (Entrez Gene)
Chr16 XP_001095392 (RefSeq)
cattle SREBF1 539361 (Entrez Gene)
Chr19 NP_001106773 (RefSeq)
NM_001113302 (RefSeq)
dog SREBF1 403475 (Entrez Gene)
Chr5 NP_001184012 (RefSeq)
NM_001197083 (RefSeq)
chicken SREBF1 373915 (Entrez Gene)
Chr14 NP_989457 (RefSeq)
NM_204126 (RefSeq)
western clawed frog srebf1 100485631 (Entrez Gene)
ChrUN XP_002935886 (RefSeq)
zebrafish srebf1 793274 (Entrez Gene)
Chr3 NP_001098599 (RefSeq)
NM_001105129 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory