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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
27865

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PDZD9 HGNC:28740 (HGNC)
255762 (Entrez Gene)
HGNC homology
Chr16 p12.2 Chr16:21957540-22001137 (-)
GRCh38.p7
Q8IXQ8 (UniProt | EBI)
NM_173806 (RefSeq)
mouse Pdzd9 MGI:1915233 (MGI)
67983 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr7 64.9 cM Chr7:120658731-120670343 (-)
GRCm38
ENSMUSG00000030887 (Ensembl Gene Model)
ENSMUSP00000033178 (Ensembl)
ENSMUST00000033178 (Ensembl)
rat Pdzd9 308954 (Entrez Gene)
Chr1 q36 NP_001019948 (RefSeq)
NM_001024777 (RefSeq)
chimpanzee PDZD9 743472 (Entrez Gene)
Chr16 XP_009428736 (RefSeq)
cattle PDZD9 537386 (Entrez Gene)
Chr25 Q32KW7 (UniProt | EBI)
NM_001076094 (RefSeq)
dog PDZD9 489978 (Entrez Gene)
Chr6 XP_022275677 (RefSeq)
macaque, rhesus PDZD9 698098 (Entrez Gene)
Chr20 XP_001092453 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory