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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2766

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RTCA HGNC:17981 (HGNC)
8634 (Entrez Gene)
611286 (OMIM)
HGNC homology
Chr1 p21.2 Chr1:100266158-100292769 (+)
GRCh38.p7
O00442 (UniProt | EBI)
NM_003729 (RefSeq)
mouse Rtca MGI:1913618 (MGI)
66368 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 50.35 cM Chr3:116488963-116508203 (-)
GRCm38
66368 (NCBI Gene Model)
Q9D7H3 (UniProt | EBI)
NM_025517 (RefSeq)
rat Rtca 295395 (Entrez Gene)
Chr2 q41 NP_001004227 (RefSeq)
NM_001004227 (RefSeq)
chimpanzee RTCA 457057 (Entrez Gene)
Chr1 XP_001160984 (RefSeq)
cattle RTCA 510469 (Entrez Gene)
Chr3 Q2HJ88 (UniProt | EBI)
NM_001046055 (RefSeq)
dog RTCA 479928 (Entrez Gene)
Chr6 XP_022276134 (RefSeq)
chicken RTCA 424468 (Entrez Gene)
Chr8 XP_422311 (RefSeq)
zebrafish rtca 321129 (Entrez Gene)
Chr22 NP_955830 (RefSeq)
NM_199536 (RefSeq)
frog, western clawed rtca 100145308 (Entrez Gene)
Chr4 NP_001120256 (RefSeq)
NM_001126784 (RefSeq)
macaque, rhesus RTCA 711623 (Entrez Gene)
Chr1 XP_028687043 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/04/2020
MGI 6.14
The Jackson Laboratory