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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2702

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GCM1 HGNC:4197 (HGNC)
8521 (Entrez Gene)
603715 (OMIM)
GCM1 (MyGene.info)
HGNC homology
Chr6 p12.1 Chr6:53125644-53262803 (-)
GRCh38.p7
Q9NP62 (UniProt | EBI)
NM_003643 (RefSeq)
mouse Gcm1 MGI:108045 (MGI)
14531 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr9 43.49 cM Chr9:78051958-78065624 (+)
GRCm38
14531 (NCBI Gene Model)
P70348 (UniProt | EBI)
NM_008103 (RefSeq)
rat Gcm1 29394 (Entrez Gene)
Chr8 q31 Q9Z288 (UniProt | EBI)
NM_017186 (RefSeq)
chimpanzee GCM1 472036 (Entrez Gene)
Chr6 XP_016811165 (RefSeq)
dog GCM1 481844 (Entrez Gene)
Chr12 XP_013973528 (RefSeq)
chicken GCM1 404300 (Entrez Gene)
Chr3 NP_996863 (RefSeq)
NM_206980 (RefSeq)
frog, western clawed gcm1 549669 (Entrez Gene)
Chr5 NP_001016915 (RefSeq)
NM_001016915 (RefSeq)
macaque, rhesus GCM1 709965 (Entrez Gene)
Chr4 XP_014991971 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory