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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
265

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTEN HGNC:9588 (HGNC)
5728 (Entrez Gene)
601728 (OMIM)
HGNC homology
Chr10 q23.31 Chr10:87863438-87971930 (+)
GRCh38.p7
Bannayan-Riley-Ruvalcaba syndrome
Cowden disease
endometrial cancer
familial meningioma
follicular thyroid carcinoma
head and neck squamous cell carcinoma
macrocephaly-autism syndrome
malignant glioma
prostate cancer
VACTERL association
P60484 (UniProt | EBI)
NM_000314 (RefSeq)
mouse Pten MGI:109583 (MGI)
19211 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr19 28.14 cM Chr19:32757497-32826160 (+)
GRCm38
acute lymphocytic leukemia
autistic disorder
Bannayan-Riley-Ruvalcaba syndrome
Cowden disease
endometrial cancer
fatty liver disease
hepatocellular carcinoma
macrocephaly-autism syndrome
persistent fetal circulation syndrome
prostate cancer
urinary bladder cancer
OTTMUSG00000021203 (VEGA)
OTTMUSP00000023423 (VEGA)
OTTMUST00000050229 (VEGA)
rat Pten 50557 (Entrez Gene)
Chr1 q52 NP_113794 (RefSeq)
NM_031606 (RefSeq)
chimpanzee PTEN 466142 (Entrez Gene)
Chr10 XP_016774311 (RefSeq)
cattle PTEN 540786 (Entrez Gene)
Chr26 NP_001306827 (RefSeq)
NM_001319898 (RefSeq)
dog PTEN 403832 (Entrez Gene)
Chr26 P60483 (UniProt | EBI)
NM_001003192 (RefSeq)
chicken PTEN 423675 (Entrez Gene)
Chr6 XP_015134187 (RefSeq)
zebrafish ptenb 368415 (Entrez Gene)
Chr12 NP_001001822 (RefSeq)
NM_001001822 (RefSeq)
frog, western clawed pten 100144716 (Entrez Gene)
Chr7 NP_001116943 (RefSeq)
NM_001123471 (RefSeq)
macaque, rhesus PTEN 705121 (Entrez Gene)
Chr9 NP_001247894 (RefSeq)
NM_001260965 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/21/2017
MGI 6.08
The Jackson Laboratory