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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
2134

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTPRN2 HGNC:9677 (HGNC)
5799 (Entrez Gene)
601698 (OMIM)
Chr7 q36 Chr7:157539056-158587796 (-)
GRCh38
Q92932 (UniProt | EBI)
NM_002847 (RefSeq)
mouse Ptprn2 MGI:107418 (MGI)
19276 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 62.65 cM Chr12:116485720-117278167 (+)
GRCm38
Diabetes Mellitus, Insulin-Dependent; IDDM
19276 (NCBI Gene Model)
P80560 (UniProt | EBI)
NM_011215 (RefSeq)
rat Ptprn2 29714 (Entrez Gene)
Chr6 q33 Q63475 (UniProt | EBI)
NM_031600 (RefSeq)
cattle PTPRN2 616515 (Entrez Gene)
Chr4 XP_001788898 (RefSeq)
dog PTPRN2 482825 (Entrez Gene)
Chr16 XP_005629771 (RefSeq)
chicken PTPRN2 420449 (Entrez Gene)
Chr2 XP_418552 (RefSeq)
zebrafish ptprn2 325033 (Entrez Gene)
Chr7 NP_001122139 (RefSeq)
NM_001128667 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory