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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1951

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PDCD2 HGNC:8762 (HGNC)
5134 (Entrez Gene)
600866 (OMIM)
PDCD2 (MyGene.info)
HGNC homology
Chr6 q27 Chr6:170575572-170584692 (-)
GRCh38.p7
Q16342 (UniProt | EBI)
NM_001199462 (RefSeq)
mouse Pdcd2 MGI:104643 (MGI)
18567 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr17 8.95 cM Chr17:15521575-15527301 (-)
GRCm38
18567 (NCBI Gene Model)
P46718 (UniProt | EBI)
NM_008799 (RefSeq)
rat Pdcd2 58934 (Entrez Gene)
Chr1 q12 P47816 (UniProt | EBI)
NM_031638 (RefSeq)
chimpanzee PDCD2 465124 (Entrez Gene)
Chr6 XP_520603 (RefSeq)
cattle PDCD2 512079 (Entrez Gene)
Chr9 Q2YDC9 (UniProt | EBI)
NM_001046109 (RefSeq)
dog PDCD2 475041 (Entrez Gene)
Chr12 XP_854542 (RefSeq)
chicken PDCD2 421550 (Entrez Gene)
Chr3 NP_001026235 (RefSeq)
NM_001031064 (RefSeq)
zebrafish pdcd2 393370 (Entrez Gene)
Chr13 NP_001038603 (RefSeq)
NM_001045138 (RefSeq)
frog, western clawed pdcd2 100126680 (Entrez Gene)
Chr5 XP_002931535 (RefSeq)
macaque, rhesus PDCD2 696380 (Entrez Gene)
Chr4 XP_014993237 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory