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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1897

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NTHL1 HGNC:8028 (HGNC)
4913 (Entrez Gene)
602656 (OMIM)
NTHL1 (MyGene.info)
HGNC homology
Chr16 p13.3 Chr16:2039815-2047872 (-)
GRCh38.p7
familial adenomatous polyposis 3
P78549 (UniProt | EBI)
NM_002528 (RefSeq)
mouse Nthl1 MGI:1313275 (MGI)
18207 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr17 12.42 cM Chr17:24632682-24638838 (+)
GRCm38
18207 (NCBI Gene Model)
O35980 (UniProt | EBI)
NM_008743 (RefSeq)
rat Nthl1 29541 (Entrez Gene)
Chr10 q12 NP_001099198 (RefSeq)
NM_001105728 (RefSeq)
cattle NTHL1 535203 (Entrez Gene)
Chr25 Q2KID2 (UniProt | EBI)
NM_001046397 (RefSeq)
dog NTHL1 610981 (Entrez Gene)
Chr6 XP_853674 (RefSeq)
chicken NTHL1 416551 (Entrez Gene)
Chr14 A7M7B9 (UniProt | EBI)
NM_001079575 (RefSeq)
zebrafish nthl1 100008368 (Entrez Gene)
Chr1 XP_001346643 (RefSeq)
frog, western clawed LOC100488928 100488928 (Entrez Gene)
Chr9
nthl1 733472 (Entrez Gene)
Chr9 NP_001037884 (RefSeq)
NM_001044419 (RefSeq)
macaque, rhesus NTHL1 694848 (Entrez Gene)
Chr20 XP_028697328 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory