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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
15776

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPARGC1B HGNC:30022 (HGNC)
133522 (Entrez Gene)
608886 (OMIM)
Chr5 q32 Chr5:149730252-149855022 (+)
GRCh38
Obesity
Q86YN6 (UniProt | EBI)
NM_133263 (RefSeq)
mouse Ppargc1b MGI:2444934 (MGI)
170826 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 34.41 cM Chr18:61298136-61400431 (-)
GRCm38
OTTMUSG00000024012 (VEGA)
OTTMUSP00000028587 (VEGA)
OTTMUST00000058872 (VEGA)
rat Ppargc1b 291567 (Entrez Gene)
Chr18 q12.1 Q811R2 (UniProt | EBI)
NM_176075 (RefSeq)
chimpanzee PPARGC1B 471692 (Entrez Gene)
Chr5 XP_003310943 (RefSeq)
rhesus macaque LOC711027 711027 (Entrez Gene)
Chr6 XP_002804631 (RefSeq)
cattle PPARGC1B 514750 (Entrez Gene)
Chr7 XP_003582506 (RefSeq)
dog PPARGC1B 489190 (Entrez Gene)
Chr4 XP_546308 (RefSeq)
chicken PPARGC1B 416148 (Entrez Gene)
Chr13 XP_414479 (RefSeq)
zebrafish ppargc1b 555906 (Entrez Gene)
Chr14 XP_003199944 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory