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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
137649

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Pcdhb18 MGI:2136756 (MGI)
93889 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 19.5 cM Chr18:37489465-37494503 (+)
GRCm38
93889 (NCBI Gene Model)
Q91Y02 (UniProt | EBI)
NM_053143 (RefSeq)
rat Pcdhb17 548104 (Entrez Gene)
Chr18 p11 XP_017443354 (RefSeq)
frog, western clawed LOC100494436 100494436 (Entrez Gene)
Chr3 XP_017948117 (RefSeq)
LOC101731154 101731154 (Entrez Gene)
ChrUN
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory