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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PAX6 HGNC:8620 (HGNC)
5080 (Entrez Gene)
607108 (OMIM)
PAX6 (MyGene.info)
HGNC homology
Chr11 p13 Chr11:31784792-31817961 (-)
coloboma of optic nerve
Peters anomaly
WAGR syndrome
P26367 (UniProt | EBI)
NM_001604 (RefSeq)
mouse Pax6 MGI:97490 (MGI)
18508 (Entrez Gene)
Gene Tree
HGNC homology
Chr2 55.31 cM Chr2:105668900-105697364 (+)
juvenile glaucoma
Peters anomaly
ENSMUSG00000027168 (Ensembl Gene Model)
ENSMUSP00000106715 (Ensembl)
ENSMUST00000111086 (Ensembl)
rat Pax6 25509 (Entrez Gene)
Chr3 q33 P63016 (UniProt | EBI)
NM_013001 (RefSeq)
chimpanzee PAX6 737387 (Entrez Gene)
Chr11 XP_024202786 (RefSeq)
cattle PAX6 286857 (Entrez Gene)
Chr15 Q1LZF1 (UniProt | EBI)
NM_001040645 (RefSeq)
chicken PAX6 395943 (Entrez Gene)
Chr5 P47237 (UniProt | EBI)
NM_205066 (RefSeq)
zebrafish pax6a 30567 (Entrez Gene)
Chr25 P26630 (UniProt | EBI)
NM_131304 (RefSeq)
frog, western clawed pax6 448447 (Entrez Gene)
Chr4 NP_001006763 (RefSeq)
NM_001006762 (RefSeq)
macaque, rhesus PAX6 695746 (Entrez Gene)
Chr14 NP_001253186 (RefSeq)
NM_001266257 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.13
The Jackson Laboratory