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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
1212

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PAX6 HGNC:8620 (HGNC)
5080 (Entrez Gene)
607108 (OMIM)
Chr11 p13 Chr11:31784792-31817961 (-)
GRCh38
Aniridia, Cerebellar Ataxia, and Mental Retardation
Aniridia; AN
Coloboma of Optic Nerve
Foveal Hypoplasia 1; FVH1
Keratitis, Hereditary
Optic Nerve Hypoplasia, Bilateral
Peters Anomaly
Wilms Tumor, Aniridia, Genitourinary Anomalies, and Mental Retardation Syndrome; WAGR
P26367 (UniProt | EBI)
NM_000280 (RefSeq)
mouse Pax6 MGI:97490 (MGI)
18508 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 55.31 cM Chr2:105668900-105697364 (+)
GRCm38
Aniridia; AN
Anterior Segment Mesenchymal Dysgenesis; ASMD
Keratitis, Hereditary
Peters Anomaly
OTTMUSG00000015006 (VEGA)
OTTMUSP00000015972 (VEGA)
OTTMUST00000035640 (VEGA)
rat Pax6 25509 (Entrez Gene)
Chr3 q32 P63016 (UniProt | EBI)
NM_013001 (RefSeq)
chimpanzee PAX6 737387 (Entrez Gene)
Chr11 XP_003954413 (RefSeq)
rhesus macaque PAX6 695746 (Entrez Gene)
Chr14 NP_001253186 (RefSeq)
NM_001266257 (RefSeq)
cattle PAX6 286857 (Entrez Gene)
Chr15 Q1LZF1 (UniProt | EBI)
NM_001040645 (RefSeq)
chicken PAX6 395943 (Entrez Gene)
Chr5 P47237 (UniProt | EBI)
NM_205066 (RefSeq)
western clawed frog pax6 448447 (Entrez Gene)
ChrUN NP_001006763 (RefSeq)
NM_001006762 (RefSeq)
zebrafish pax6a 30567 (Entrez Gene)
Chr25 P26630 (UniProt | EBI)
NM_131304 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory