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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
117703

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SYNJ2 HGNC:11504 (HGNC)
8871 (Entrez Gene)
609410 (OMIM)
SYNJ2 (gene) (MyGene.info)
HGNC homology
Chr6 q25.3 Chr6:157981856-158099176 (+)
GRCh38.p7
O15056 (UniProt | EBI)
NM_001178088 (RefSeq)
mouse Synj2 MGI:1201671 (MGI)
20975 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr17 3.59 cM Chr17:5941280-6044290 (+)
GRCm38
ENSMUSG00000023805 (Ensembl Gene Model)
ENSMUSP00000111457 (Ensembl)
ENSMUST00000115791 (Ensembl)
rat Synj2 84018 (Entrez Gene)
Chr1 q11 O55207 (UniProt | EBI)
NM_001113372 (RefSeq)
chimpanzee SYNJ2 463094 (Entrez Gene)
Chr6 XP_016812024 (RefSeq)
cattle SYNJ2 518435 (Entrez Gene)
Chr9 XP_024852879 (RefSeq)
dog SYNJ2 484052 (Entrez Gene)
Chr1 XP_013971243 (RefSeq)
chicken SYNJ2 421656 (Entrez Gene)
Chr3 XP_015139702 (RefSeq)
frog, western clawed synj2 100216051 (Entrez Gene)
Chr5 NP_001135511 (RefSeq)
NM_001142039 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/17/2019
MGI 6.14
The Jackson Laboratory