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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11691

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HPS6 HGNC:18817 (HGNC)
79803 (Entrez Gene)
607522 (OMIM)
Chr10 q24.32 Chr10:102065367-102068038 (+)
GRCh38
Hermansky-Pudlak Syndrome 6; HPS6
Q86YV9 (UniProt | EBI)
NM_024747 (RefSeq)
mouse Hps6 MGI:2181763 (MGI)
20170 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 38.75 cM Chr19:46003478-46006173 (+)
GRCm38
Hermansky-Pudlak Syndrome 6; HPS6
20170 (NCBI Gene Model)
Q8BLY7 (UniProt | EBI)
NM_176785 (RefSeq)
rat Hps6 309446 (Entrez Gene)
Chr1 q54 Q7M733 (UniProt | EBI)
NM_181432 (RefSeq)
chimpanzee HPS6 745320 (Entrez Gene)
Chr10 XP_001170704 (RefSeq)
rhesus macaque HPS6 712574 (Entrez Gene)
Chr9 NP_001181458 (RefSeq)
NM_001194529 (RefSeq)
cattle HPS6 511792 (Entrez Gene)
Chr26 NP_001075055 (RefSeq)
NM_001081586 (RefSeq)
dog HPS6 609471 (Entrez Gene)
Chr28 XP_851823 (RefSeq)
chicken HPS6 770328 (Entrez Gene)
Chr6 XP_001233664 (RefSeq)
western clawed frog hps6 100038145 (Entrez Gene)
ChrUN XP_002940614 (RefSeq)
zebrafish LOC101882947 101882947 (Entrez Gene)
Chr13 XP_005156992 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory