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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
11596

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SH3TC2 HGNC:29427 (HGNC)
79628 (Entrez Gene)
608206 (OMIM)
Chr5 q32 Chr5:148982150-149063174 (-)
GRCh38
Charcot-Marie-Tooth Disease, Type 4c; CMT4C
Mononeuropathy of the Median Nerve, Mild; MNMN
Q8TF17 (UniProt | EBI)
NM_024577 (RefSeq)
mouse Sh3tc2 MGI:2444417 (MGI)
225608 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 34.78 cM Chr18:61953075-62015715 (+)
GRCm38
Charcot-Marie-Tooth Disease, Type 4c; CMT4C
ENSMUSG00000045629 (Ensembl Gene Model)
ENSMUSP00000055094 (Ensembl)
ENSMUST00000051720 (Ensembl)
rat Sh3tc2 307393 (Entrez Gene)
Chr18 q12.1 XP_001059165 (RefSeq)
chimpanzee SH3TC2 471691 (Entrez Gene)
Chr5 XP_001162001 (RefSeq)
rhesus macaque SH3TC2 709970 (Entrez Gene)
Chr6 XP_001104537 (RefSeq)
cattle SH3TC2 536167 (Entrez Gene)
Chr7 XP_616288 (RefSeq)
dog SH3TC2 489197 (Entrez Gene)
Chr4 XP_005619373 (RefSeq)
chicken SH3TC2 426627 (Entrez Gene)
Chr13 XP_424256 (RefSeq)
zebrafish LOC100535152 100535152 (Entrez Gene)
Chr14 XP_003200002 (RefSeq)
sh3tc2 100317983 (Entrez Gene)
Chr14 XP_002664477 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory