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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10744

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MCOLN1 HGNC:13356 (HGNC)
57192 (Entrez Gene)
605248 (OMIM)
Chr19 p13.2 Chr19:7522610-7534009 (+)
GRCh38
Mucolipidosis IV
Q9GZU1 (UniProt | EBI)
NM_020533 (RefSeq)
mouse Mcoln1 MGI:1890498 (MGI)
94178 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 1.92 cM Chr8:3500457-3515232 (+)
GRCm38
Mucolipidosis IV
OTTMUSG00000026357 (VEGA)
OTTMUSP00000032445 (VEGA)
OTTMUST00000065182 (VEGA)
rat Mcoln1 288371 (Entrez Gene)
Chr12 p12 NP_001099373 (RefSeq)
NM_001105903 (RefSeq)
chimpanzee MCOLN1 455656 (Entrez Gene)
Chr19 XP_001152409 (RefSeq)
rhesus macaque MCOLN1 703775 (Entrez Gene)
Chr19 NP_001247469 (RefSeq)
NM_001260540 (RefSeq)
cattle MCOLN1 505738 (Entrez Gene)
Chr7 NP_001068690 (RefSeq)
NM_001075222 (RefSeq)
dog MCOLN1 611517 (Entrez Gene)
Chr20 XP_854284 (RefSeq)
chicken MCOLN1 426164 (Entrez Gene)
ChrUN XP_423829 (RefSeq)
western clawed frog mcoln1 496811 (Entrez Gene)
ChrUN NP_001011347 (RefSeq)
NM_001011347 (RefSeq)
zebrafish mcoln1b 795916 (Entrez Gene)
Chr3 XP_001336199 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory