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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
105432

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Trim43a MGI:3645218 (MGI)
547109 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 47.24 cM Chr9:88581036-88588823 (+)
GRCm38
547109 (NCBI Gene Model)
Q3TL54 (UniProt | EBI)
NM_001357687 (RefSeq)
Trim43b MGI:3648996 (MGI)
666747 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 47.24 cM Chr9:89084624-89092835 (-)
GRCm38
666747 (NCBI Gene Model)
P86448 (UniProt | EBI)
NM_001170884 (RefSeq)
Trim43c MGI:3647365 (MGI)
666731 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 47.24 cM Chr9:88839164-88848190 (+)
GRCm38
666731 (NCBI Gene Model)
P86449 (UniProt | EBI)
NM_001177858 (RefSeq)
chimpanzee LOC470434 470434 (Entrez Gene)
Chr2A XP_024209932 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
07/09/2019
MGI 6.14
The Jackson Laboratory