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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
10304

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PTF1A HGNC:23734 (HGNC)
256297 (Entrez Gene)
607194 (OMIM)
Chr10 p12.2 Chr10:23192531-23194252 (+)
GRCh38
Pancreatic Agenesis 2; PAGEN2
Pancreatic and Cerebellar Agenesis; PACA
Q7RTS3 (UniProt | EBI)
NM_178161 (RefSeq)
mouse Ptf1a MGI:1328312 (MGI)
19213 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 13.37 cM Chr2:19445663-19447501 (+)
GRCm38
OTTMUSG00000011489 (VEGA)
OTTMUSP00000012259 (VEGA)
OTTMUST00000026858 (VEGA)
rat Ptf1a 117034 (Entrez Gene)
Chr17 q12.3 Q64305 (UniProt | EBI)
NM_053964 (RefSeq)
chimpanzee PTF1A 742903 (Entrez Gene)
Chr10 XP_009456445 (RefSeq)
cattle PTF1A 781540 (Entrez Gene)
Chr13 XP_001787738 (RefSeq)
dog PTF1A 608313 (Entrez Gene)
Chr2 XP_850386 (RefSeq)
western clawed frog ptf1a 100494161 (Entrez Gene)
ChrUN XP_002933181 (RefSeq)
zebrafish ptf1a 368662 (Entrez Gene)
Chr2 Q7ZSX3 (UniProt | EBI)
NM_207641 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory