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Gene Expression Data
      Default settings do not include RNA-Seq data; select assay type RNA-Seq to include.
Genes

Find expression data for...
One gene e.g., Shh or kit oncogene
Genes with similar nomenclature e.g., Hoxa*
List of genes e.g., Wnt1, Bmp7, En1, Isl1... 		|
OR
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A set of genes defined by
  • Function e.g., cell-cell signalling
  • Phenotype e.g., obese
  • Disease e.g., DiGeorge Syndrome
 

Genome location
Find expression data for a set of genes defined by
genomic interval(s) (genome build GRCm39).
e.g., Chr12:3000000-10000000
Anatomical structure or stage
Find assay results where expression is    
Anatomical Structures: AND / OR     Developmental Stages:

 
Use Theiler Stages
Use Ages (dpc)
Mutant / wild type
Find expression data in ...
Assay types

  
Warning. Invalid Selection
      Search for genes by expression profile. Select an Assay Type to activate the form.
☞
Find genes where expression is: Show Theiler Stage selectors
Show Theiler Stage selectors ...

You can restrict your query to specific Theiler Stages for each structure specified. You can also query for stages without specifying a structure. NOTE: that when you toggle this button, previous stage specifications (if any) are discarded.

Detected Not
detected
NOT detected or analyzed in... NOT detected in...

The search will return genes whose expression was absent (not detected), as well as genes whose expression has not been analyzed or recorded in the database for the specified structure.

The search will return genes whose expression is below the TPM cutoff value (<0.5 TPM) for the specified structure.

Anatomical Structure and/or Theiler Stage(s)
      Expression Profile Search limited to expression data from wild-type specimens.
  
Genes
Search by:
Enter Text

ID/Symbols List:
  
  * tab, space, and newline separated ids
  * limit input to 5000 ids/symbols

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OR
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Use IDs from a File
File Type:
   tab-delimited
   comma separated
ID/Symbols column:
  
* ID/Symbols parsed from a single column

ID/Symbols File:
  

  

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory