Compare GO annotations for ORTHOMCL1940 PPOD cluster

Possible outliers might be spotted in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.

Annotations are indicated by colored nodes: human, mouse, rat, chicken, zfish, fly, worm, dicty, dicot, yeast, pombe, ecoli.
Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Red arrows indicate "regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Chicken from GOA; Zfish from Zfin; Fly from Flybase; Worm from Wormbase; Dicot from TAIR; Dicty from Dictybase; Yeast from SGD; Pombe from Sanger; Ecoli from EcoliHub.
Organisms with experimental annotations are indicated: EXP, IC, IDA, IEP, IGI, IMP, IPI. In addition, ISS (ISA, ISM, ISO) annotations are so indicated.
Does not include evidence codes: IEA, IGC, NAS, ND, NR, RCA, TAS.
Graph is also available as SVG (requires viewer plug-in from Adobe)
Evidence codes are listed at the bottom of the page.
Graph generated Mon Mar 30 18:25:07 2009.

Compare annotations to GO categories for ORTHOMCL1940.

Entry indicates that ortholog exists for this gene.
Colored entries indicate experimental annotation.
Parentheses indicate ISS annotation only.

Category	ID	Term	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Molecular Function	GO:0005488	binding	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Molecular Function	GO:0005198	structural molecule activity	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	(Dicty)	Dicot	Yeast	(Pombe)	X
Cellular Component	GO:0005623	cell	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	Pombe	X
Cellular Component	GO:0044464	cell part	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	Pombe	X
Cellular Component	GO:0032991	macromolecular complex	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	(Dicty)	Dicot	Yeast	(Pombe)	X
Cellular Component	GO:0031974	membrane-enclosed lumen	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Cellular Component	GO:0043226	organelle	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	(Dicty)	Dicot	Yeast	(Pombe)	X
Cellular Component	GO:0044422	organelle part	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	Dicty	Dicot	Yeast	(Pombe)	X
Biological Process	GO:0065007	biological regulation	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0009987	cellular process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	(Pombe)	X
Biological Process	GO:0032502	developmental process	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0040007	growth	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0008152	metabolic process	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	Worm	(Dicty)	Dicot	Yeast	(Pombe)	X
Biological Process	GO:0032501	multicellular organismal process	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0048519	negative regulation of biological process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0050789	regulation of biological process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0000003	reproduction	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X

Full set of experimental (and ISS) annotations for ORTHOMCL1940

Category	ID	Term	DB Object	Evidence	With_From	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	P62277	IDA		Human	PMID:17881366
Molecular Function	GO:0003729	mRNA binding	Rps13	ISO	RGD:737303	Rat	RGD:1624291
Molecular Function	GO:0005515	protein binding	P62277	IPI	UniProtKB:Q53EL6	Human	PMID:12054647
Molecular Function	GO:0005515	protein binding	Rps13	ISO	RGD:737303	Rat	RGD:1624291
Molecular Function	GO:0070181	SSU rRNA binding	RPS13	IDA		Yeast	SGD_REF:S000056868\|PMID:2517480
Molecular Function	GO:0003735	structural constituent of ribosome	RpS13	ISS	SGD:S0002471	Fly	FB:FBrf0105495
Molecular Function	GO:0003735	structural constituent of ribosome	rps13	ISS	InterPro:IPR000589	Dicty	dictyBase_REF:10155
Molecular Function	GO:0003735	structural constituent of ribosome	RPS13	IDA		Yeast	SGD_REF:S000064930\|PMID:6814480
Molecular Function	GO:0003735	structural constituent of ribosome	RPS13	IDA		Yeast	SGD_REF:S000056868\|PMID:2517480
Molecular Function	GO:0003735	structural constituent of ribosome	RPS13	IDA		Yeast	SGD_REF:S000116584\|PMID:3533916
Molecular Function	GO:0003735	structural constituent of ribosome	rps13	ISS	SGD:S000002471	Pombe	PMID:17072883
Cellular Component	GO:0030686	90S preribosome	RPS13	IDA		Yeast	SGD_REF:S000086600\|PMID:12150911
Cellular Component	GO:0005618	cell wall	AT3G60770.1	IDA		Dicot	TAIR:Publication:501718077\|PMID:16287169
Cellular Component	GO:0009507	chloroplast	AT3G60770.1	IDA		Dicot	TAIR:Publication:501712079\|PMID:15028209
Cellular Component	GO:0005829	cytosol	P62277	EXP		Human	PMID:12588972
Cellular Component	GO:0005829	cytosol	Rps13	ISO	RGD:737303	Rat	RGD:1624291
Cellular Component	GO:0005829	cytosol	rps13	IDA		Pombe	PMID:16823372
Cellular Component	GO:0022626	cytosolic ribosome	AT3G60770.1	IDA		Dicot	TAIR:Publication:501714975\|PMID:15821981
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	P62277	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	P62277	IDA		Human	PMID:15883184
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps13	ISO	RGD:737303	Rat	RGD:1624291
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps13	IDA		Rat	RGD:2300010\|PMID:947902
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps13	IDA		Rat	RGD:1599573\|PMID:2328735
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RpS13	ISS	SGD:S0002471	Fly	FB:FBrf0105495
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS13	IDA		Yeast	SGD_REF:S000116584\|PMID:3533916
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS13	IDA		Yeast	SGD_REF:S000064930\|PMID:6814480
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS13	IDA		Yeast	SGD_REF:S000056868\|PMID:2517480
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	rps13	ISS	SGD:S000002471	Pombe	PMID:17072883
Cellular Component	GO:0005811	lipid particle	RpS13	IDA		Fly	FB:FBrf0192764\|PMID:16979555
Cellular Component	GO:0016020	membrane	ATRPS13A	IDA		Dicot	TAIR:Publication:501721401\|PMID:17432890
Cellular Component	GO:0005730	nucleolus	P62277	IDA		Human	PMID:17881366
Cellular Component	GO:0005730	nucleolus	Rps13	ISO	RGD:737303	Rat	RGD:1624291
Cellular Component	GO:0005730	nucleolus	AT3G60770.1	IDA		Dicot	TAIR:Publication:501714224\|PMID:15496452
Cellular Component	GO:0005730	nucleolus	ATRPS13A	IDA		Dicot	TAIR:Publication:501714224\|PMID:15496452
Cellular Component	GO:0005634	nucleus	P62277	IDA		Human	PMID:17881366
Cellular Component	GO:0005634	nucleus	Rps13	ISO	RGD:737303	Rat	RGD:1624291
Cellular Component	GO:0005840	ribosome	rps13	ISS	InterPro:IPR000589	Dicty	dictyBase_REF:10155
Biological Process	GO:0009792	embryonic development ending in birth or egg hatching	rps-13	IMP	WB:WBRNAi00002533\|WB:WBPhenotype:0000050	Worm	WB:WBPaper00004403\|PMID:11099034
Biological Process	GO:0009792	embryonic development ending in birth or egg hatching	rps-13	IMP	WB:WBRNAi00033309\|WB:WBPhenotype:0000050	Worm	WB:WBPaper00024497\|PMID:15489339
Biological Process	GO:0009792	embryonic development ending in birth or egg hatching	rps-13	IMP	WB:WBRNAi00040666\|WB:WBPhenotype:0000050	Worm	WB:WBPaper00025054\|PMID:15791247
Biological Process	GO:0040007	growth	rps-13	IMP	WB:WBRNAi00024575\|WB:WBPhenotype:0000059	Worm	WB:WBPaper00006395\|PMID:14551910
Biological Process	GO:0040007	growth	rps-13	IMP	WB:WBRNAi00033309\|WB:WBPhenotype:0000059	Worm	WB:WBPaper00024497\|PMID:15489339
Biological Process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	RPS13	IMP		Yeast	SGD_REF:S000087225\|PMID:16246728
Biological Process	GO:0000022	mitotic spindle elongation	RpS13	IMP		Fly	FB:FBrf0200397\|PMID:17412918
Biological Process	GO:0007052	mitotic spindle organization	RpS13	IMP		Fly	FB:FBrf0200397\|PMID:17412918
Biological Process	GO:0033119	negative regulation of RNA splicing	P62277	IDA		Human	PMID:17881366
Biological Process	GO:0033119	negative regulation of RNA splicing	Rps13	ISO	RGD:737303	Rat	RGD:1624291
Biological Process	GO:0002119	nematode larval development	rps-13	IMP	WB:WBRNAi00024575\|WB:WBPhenotype:0000059	Worm	WB:WBPaper00006395\|PMID:14551910
Biological Process	GO:0002119	nematode larval development	rps-13	IMP	WB:WBRNAi00033309\|WB:WBPhenotype:0000059	Worm	WB:WBPaper00024497\|PMID:15489339
Biological Process	GO:0000003	reproduction	rps-13	IMP	WB:WBRNAi00008408\|WB:WBPhenotype:0000689	Worm	WB:WBPaper00005654\|PMID:12529635
Biological Process	GO:0000003	reproduction	rps-13	IMP	WB:WBRNAi00024575\|WB:WBPhenotype:0000689	Worm	WB:WBPaper00006395\|PMID:14551910
Biological Process	GO:0006412	translation	RpS13	ISS	SGD:S0002471	Fly	FB:FBrf0105495
Biological Process	GO:0006412	translation	rps13	ISS	InterPro:IPR000589	Dicty	dictyBase_REF:10155
Biological Process	GO:0006412	translation	RPS13	IC	GO:0022627	Yeast	SGD_REF:S000064930\|PMID:6814480
Biological Process	GO:0006412	translation	RPS13	IC	GO:0022627	Yeast	SGD_REF:S000116584\|PMID:3533916
Biological Process	GO:0006412	translation	RPS13	IC	GO:0022627	Yeast	SGD_REF:S000056868\|PMID:2517480
Biological Process	GO:0006412	translation	rps13	ISS	SGD:S000002471	Pombe	PMID:17072883
Biological Process	GO:0006414	translational elongation	P62277	EXP		Human	PMID:15189156
Biological Process	GO:0006414	translational elongation	Rps13	ISO	RGD:737303	Rat	RGD:1624291

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IC Inferred by curator

IDA Inferred from direct assay

IEA Inferred from electronic annotation

IEP Inferred from expression pattern

IGC Inferred from genomic context

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

NAS Non-traceable Author Statement

ND No biological data available

RCA Reviewed computational analysis

TAS Traceable author statement

NR Not recorded (appears in some legacy annotations)