Compare GO annotations for ORTHOMCL1670 PPOD cluster

Possible outliers might be spotted in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.

Annotations are indicated by colored nodes: human, mouse, rat, chicken, zfish, fly, worm, dicty, dicot, yeast, pombe, ecoli.
Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Red arrows indicate "regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Chicken from GOA; Zfish from Zfin; Fly from Flybase; Worm from Wormbase; Dicot from TAIR; Dicty from Dictybase; Yeast from SGD; Pombe from Sanger; Ecoli from EcoliHub.
Organisms with experimental annotations are indicated: EXP, IC, IDA, IEP, IGI, IMP, IPI. In addition, ISS (ISA, ISM, ISO) annotations are so indicated.
Does not include evidence codes: IEA, IGC, NAS, ND, NR, RCA, TAS.
Graph is also available as SVG (requires viewer plug-in from Adobe)
Evidence codes are listed at the bottom of the page.
Graph generated Mon Mar 30 18:25:07 2009.

Compare annotations to GO categories for ORTHOMCL1670.

Entry indicates that ortholog exists for this gene.
Colored entries indicate experimental annotation.
Parentheses indicate ISS annotation only.

Category	ID	Term	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Molecular Function	GO:0005488	binding	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	Pombe	Ecoli
Molecular Function	GO:0005198	structural molecule activity	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	(Dicty)	Dicot	Yeast	(Pombe)	Ecoli
Cellular Component	GO:0005623	cell	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Cellular Component	GO:0044464	cell part	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Cellular Component	GO:0032991	macromolecular complex	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	Dicty	Dicot	Yeast	(Pombe)	Ecoli
Cellular Component	GO:0043226	organelle	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Cellular Component	GO:0044422	organelle part	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	Dicty	Dicot	Yeast	(Pombe)	Ecoli
Biological Process	GO:0010926	anatomical structure formation	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0009987	cellular process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	(Pombe)	Ecoli
Biological Process	GO:0032502	developmental process	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0040007	growth	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0008152	metabolic process	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	Worm	(Dicty)	Dicot	Yeast	(Pombe)	Ecoli
Biological Process	GO:0032501	multicellular organismal process	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0000003	reproduction	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0050896	response to stimulus	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli

Full set of experimental (and ISS) annotations for ORTHOMCL1670

Category	ID	Term	DB Object	Evidence	With_From	Organism	Reference
Molecular Function	GO:0005515	protein binding	P62280	IPI	UniProtKB:O15479	Human	PMID:17353931
Molecular Function	GO:0005515	protein binding	P62280	IPI	UniProtKB:O60739	Human	PMID:17353931
Molecular Function	GO:0005515	protein binding	P62280	IPI	UniProtKB:Q99608	Human	PMID:17353931
Molecular Function	GO:0005515	protein binding	P62280	IPI	UniProtKB:Q9NY93	Human	PMID:17353931
Molecular Function	GO:0005515	protein binding	P62280	IPI	UniProtKB:Q9Y230	Human	PMID:17353931
Molecular Function	GO:0005515	protein binding	Rps11	ISO	RGD:733888	Rat	RGD:1624291
Molecular Function	GO:0003723	RNA binding	rps11	ISS	UniProt:P04643	Dicty	dictyBase_REF:10155
Molecular Function	GO:0019843	rRNA binding	rpsQ	IDA		Ecoli	PMID:4598121
Molecular Function	GO:0070181	SSU rRNA binding	rpsQ	IDA		Ecoli	PMID:4598121
Molecular Function	GO:0003735	structural constituent of ribosome	RpS11	ISS		Fly	FB:FBrf0104344
Molecular Function	GO:0003735	structural constituent of ribosome	RpS11	ISS	NCBI_gi:4506681	Fly	FB:FBrf0105495
Molecular Function	GO:0003735	structural constituent of ribosome	rps11	ISS	SGD:S0000252	Dicty	dictyBase_REF:10155
Molecular Function	GO:0003735	structural constituent of ribosome	RPS11A	IDA		Yeast	SGD_REF:S000064930\|PMID:6814480
Molecular Function	GO:0003735	structural constituent of ribosome	RPS11B	IDA		Yeast	SGD_REF:S000064930\|PMID:6814480
Molecular Function	GO:0003735	structural constituent of ribosome	rps1102	ISS	SGD:S000002432	Pombe	PMID:17072883
Molecular Function	GO:0003735	structural constituent of ribosome	rps1101	ISS	SGD:S000002432	Pombe	PMID:17072883
Molecular Function	GO:0003735	structural constituent of ribosome	rpsQ	IDA		Ecoli	PMID:4587209
Cellular Component	GO:0030686	90S preribosome	RPS11A	IDA		Yeast	SGD_REF:S000086600\|PMID:12150911
Cellular Component	GO:0030686	90S preribosome	RPS11B	IDA		Yeast	SGD_REF:S000086600\|PMID:12150911
Cellular Component	GO:0005618	cell wall	EMB1080	IDA		Dicot	TAIR:Publication:501718077\|PMID:16287169
Cellular Component	GO:0005829	cytosol	P62280	EXP		Human	PMID:12588972
Cellular Component	GO:0005829	cytosol	Rps11	ISO	RGD:733888	Rat	RGD:1624291
Cellular Component	GO:0005829	cytosol	rps1101	IDA		Pombe	PMID:16823372
Cellular Component	GO:0022626	cytosolic ribosome	EMB1080	IDA		Dicot	TAIR:Publication:501714975\|PMID:15821981
Cellular Component	GO:0022626	cytosolic ribosome	rpsQ	IDA		Ecoli	PMID:4587209
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	P62280	IDA		Human	PMID:15883184
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	P62280	IDA		Human	PMID:8706699
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps11	ISO	RGD:733888	Rat	RGD:1624291
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps11	IDA		Rat	RGD:2300014\|PMID:925037
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	Rps11	IDA		Rat	RGD:633996\|PMID:3838984
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RpS11	ISS		Fly	FB:FBrf0104344
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RpS11	ISS	NCBI_gi:4506681	Fly	FB:FBrf0105495
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS11A	IDA		Yeast	SGD_REF:S000064930\|PMID:6814480
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	RPS11B	IDA		Yeast	SGD_REF:S000064930\|PMID:6814480
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	rps1102	ISS	SGD:S000002432	Pombe	PMID:17072883
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	rps1101	ISS	SGD:S000002432	Pombe	PMID:17072883
Cellular Component	GO:0022627	cytosolic small ribosomal subunit	rpsQ	IDA		Ecoli	PMID:4587209
Cellular Component	GO:0016020	membrane	EMB1080	IDA		Dicot	TAIR:Publication:501721401\|PMID:17432890
Cellular Component	GO:0016020	membrane	RPS11-BETA	IDA		Dicot	TAIR:Publication:501721401\|PMID:17432890
Cellular Component	GO:0005634	nucleus	rps1101	IDA		Pombe	PMID:16823372
Biological Process	GO:0008340	determination of adult life span	rps-11	IMP		Worm	WB:WBPaper00029008
Biological Process	GO:0009792	embryonic development ending in birth or egg hatching	rps-11	IMP	WB:WBRNAi00046849\|WB:WBPhenotype:0000050	Worm	WB:WBPaper00025054\|PMID:15791247
Biological Process	GO:0040007	growth	rps-11	IMP	WB:WBRNAi00066264\|WB:WBPhenotype:0000059	Worm	WB:WBPaper00029254\|PMID:17411345
Biological Process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	RPS11A	IGI	SGD:S000000252	Yeast	SGD_REF:S000087225\|PMID:16246728
Biological Process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	RPS11B	IGI	SGD:S000002432	Yeast	SGD_REF:S000087225\|PMID:16246728
Biological Process	GO:0000022	mitotic spindle elongation	RpS11	IMP		Fly	FB:FBrf0200397\|PMID:17412918
Biological Process	GO:0007052	mitotic spindle organization	RpS11	IMP		Fly	FB:FBrf0200397\|PMID:17412918
Biological Process	GO:0018996	molting cycle, collagen and cuticulin-based cuticle	rps-11	IMP	WB:WBRNAi00066865\|WB:WBPhenotype:0000638	Worm	WB:WBPaper00026763\|PMID:16122351
Biological Process	GO:0002119	nematode larval development	rps-11	IMP	WB:WBRNAi00066264\|WB:WBPhenotype:0000059	Worm	WB:WBPaper00029254\|PMID:17411345
Biological Process	GO:0000003	reproduction	rps-11	IMP	WB:WBRNAi00008770\|WB:WBPhenotype:0000689	Worm	WB:WBPaper00005654\|PMID:12529635
Biological Process	GO:0000003	reproduction	rps-11	IMP	WB:WBRNAi00025452\|WB:WBPhenotype:0000689	Worm	WB:WBPaper00006395\|PMID:14551910
Biological Process	GO:0046677	response to antibiotic	rpsQ	IMP		Ecoli	PMID:765484
Biological Process	GO:0000028	ribosomal small subunit assembly	RPS11A	IMP		Yeast	SGD_REF:S000053615\|PMID:8070651
Biological Process	GO:0000028	ribosomal small subunit assembly	RPS11B	IMP		Yeast	SGD_REF:S000053615\|PMID:8070651
Biological Process	GO:0006412	translation	RpS11	ISS		Fly	FB:FBrf0104344
Biological Process	GO:0006412	translation	RpS11	ISS	NCBI_gi:4506681	Fly	FB:FBrf0105495
Biological Process	GO:0006412	translation	rps11	ISS	SGD:S0000252	Dicty	dictyBase_REF:10155
Biological Process	GO:0006412	translation	RPS11A	IC	GO:0022627	Yeast	SGD_REF:S000064930\|PMID:6814480
Biological Process	GO:0006412	translation	RPS11B	IC	GO:0022627	Yeast	SGD_REF:S000064930\|PMID:6814480
Biological Process	GO:0006412	translation	rps1102	ISS	SGD:S000002432	Pombe	PMID:17072883
Biological Process	GO:0006412	translation	rps1101	ISS	SGD:S000002432	Pombe	PMID:17072883
Biological Process	GO:0006412	translation	rpsQ	IDA		Ecoli	PMID:4579428
Biological Process	GO:0006414	translational elongation	P62280	EXP		Human	PMID:15189156
Biological Process	GO:0006414	translational elongation	Rps11	ISO	RGD:733888	Rat	RGD:1624291

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IC Inferred by curator

IDA Inferred from direct assay

IEA Inferred from electronic annotation

IEP Inferred from expression pattern

IGC Inferred from genomic context

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

NAS Non-traceable Author Statement

ND No biological data available

RCA Reviewed computational analysis

TAS Traceable author statement

NR Not recorded (appears in some legacy annotations)