Compare GO annotations for ORTHOMCL13582 PPOD cluster

Possible outliers might be spotted in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.

Annotations are indicated by colored nodes: human, mouse, rat, chicken, zfish, fly, worm, dicty, dicot, yeast, pombe, ecoli.
Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Red arrows indicate "regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Chicken from GOA; Zfish from Zfin; Fly from Flybase; Worm from Wormbase; Dicot from TAIR; Dicty from Dictybase; Yeast from SGD; Pombe from Sanger; Ecoli from EcoliHub.
Organisms with experimental annotations are indicated: EXP, IC, IDA, IEP, IGI, IMP, IPI. In addition, ISS (ISA, ISM, ISO) annotations are so indicated.
Does not include evidence codes: IEA, IGC, NAS, ND, NR, RCA, TAS.
Graph is also available as SVG (requires viewer plug-in from Adobe)
Evidence codes are listed at the bottom of the page.
Graph generated Mon Mar 30 18:25:07 2009.

Compare annotations to GO categories for ORTHOMCL13582.

Entry indicates that ortholog exists for this gene.
Colored entries indicate experimental annotation.
Parentheses indicate ISS annotation only.

Category	ID	Term	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Molecular Function	GO:0005488	binding	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Molecular Function	GO:0030528	transcription regulator activity	Human	Mouse	(Rat)	Chicken	Zfish	X	X	X	X	X	X	X
Cellular Component	GO:0005623	cell	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Cellular Component	GO:0044464	cell part	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Cellular Component	GO:0032991	macromolecular complex	Human	Mouse	Rat	Chicken	Zfish	X	X	X	X	X	X	X
Cellular Component	GO:0031974	membrane-enclosed lumen	Human	Mouse	Rat	Chicken	Zfish	X	X	X	X	X	X	X
Cellular Component	GO:0043226	organelle	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Cellular Component	GO:0044422	organelle part	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0010926	anatomical structure formation	Human	(Mouse)	Rat	Chicken	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0065007	biological regulation	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0009987	cellular process	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0032502	developmental process	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0051234	establishment of localization	Human	Mouse	(Rat)	Chicken	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0040007	growth	Human	Mouse	(Rat)	Chicken	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0051179	localization	Human	Mouse	(Rat)	Chicken	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0008152	metabolic process	Human	Mouse	Rat	Chicken	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0048519	negative regulation of biological process	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0048518	positive regulation of biological process	Human	Mouse	Rat	Chicken	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0050789	regulation of biological process	Human	Mouse	Rat	(Chicken)	Zfish	X	X	X	X	X	X	X
Biological Process	GO:0050896	response to stimulus	Human	Mouse	(Rat)	Chicken	Zfish	X	X	X	X	X	X	X

Full set of experimental (and ISS) annotations for ORTHOMCL13582

Category	ID	Term	DB Object	Evidence	With_From	Organism	Reference
Molecular Function	GO:0003677	DNA binding	Npm1	IDA		Rat	RGD:1600911\|PMID:8611572
Molecular Function	GO:0019899	enzyme binding	Npm1	IDA		Rat	RGD:1600909\|PMID:11481036
Molecular Function	GO:0019899	enzyme binding	Npm1	IPI	RGD:620335	Rat	RGD:1600871\|PMID:15893727
Molecular Function	GO:0042393	histone binding	P06748	IDA		Human	PMID:11602260
Molecular Function	GO:0042393	histone binding	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Molecular Function	GO:0051059	NF-kappaB binding	P06748	IDA		Human	PMID:15087454
Molecular Function	GO:0051059	NF-kappaB binding	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Molecular Function	GO:0051059	NF-kappaB binding	P16039	ISS	UniProtKB:P06748	Chicken	GO_REF:0000024
Molecular Function	GO:0005547	phosphatidylinositol-3,4,5-triphosphate binding	Npm1	IPI	ChEBI:16618	Rat	RGD:1600871\|PMID:15893727
Molecular Function	GO:0005515	protein binding	Npm1	IPI	UniProtKB:Q64364	Mouse	MGI:MGI:3511413\|PMID:15485902
Molecular Function	GO:0005515	protein binding	Npm1	IPI	UniProtKB:O88443	Mouse	MGI:MGI:1270060\|PMID:9642267
Molecular Function	GO:0005515	protein binding	Npm1	IPI	UniProtKB:P62843\|UniProtKB:Q6ZWU9\|UniProtKB:P62960\|UniProtKB:Q61858\|UniProtKB:Q9CPP0	Mouse	MGI:MGI:3573985\|PMID:15596447
Molecular Function	GO:0005515	protein binding	Npm1	IPI	UniProtKB:107926\|UniProtKB:P20152	Mouse	MGI:MGI:3697024\|PMID:17015463
Molecular Function	GO:0005515	protein binding	Npm1	IPI	UniProtKB:P47962	Mouse	MGI:MGI:3625664\|PMID:16648475
Molecular Function	GO:0005515	protein binding	Npm1	ISO	UniProtKB:P06748	Mouse	MGI:MGI:2154458
Molecular Function	GO:0005515	protein binding	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Molecular Function	GO:0046982	protein heterodimerization activity	P06748	IMP		Human	PMID:12080348
Molecular Function	GO:0046982	protein heterodimerization activity	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Molecular Function	GO:0042803	protein homodimerization activity	P06748	IDA		Human	PMID:9121481
Molecular Function	GO:0042803	protein homodimerization activity	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Molecular Function	GO:0043023	ribosomal large subunit binding	Npm1	ISO	UniProtKB:P06748	Mouse	MGI:MGI:3822232\|PMID:18809582
Molecular Function	GO:0043024	ribosomal small subunit binding	Npm1	ISO	UniProtKB:P06748	Mouse	MGI:MGI:3822232\|PMID:18809582
Molecular Function	GO:0003723	RNA binding	P06748	IDA		Human	PMID:12058066
Molecular Function	GO:0003723	RNA binding	Npm1	IDA		Mouse	MGI:MGI:3615094\|PMID:16376875
Molecular Function	GO:0003723	RNA binding	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Molecular Function	GO:0003723	RNA binding	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Molecular Function	GO:0019843	rRNA binding	Npm1	IDA		Mouse	MGI:MGI:3573985\|PMID:15596447
Molecular Function	GO:0019843	rRNA binding	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Molecular Function	GO:0019843	rRNA binding	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Molecular Function	GO:0030957	Tat protein binding	P06748	IDA		Human	PMID:9094689
Molecular Function	GO:0030957	Tat protein binding	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Molecular Function	GO:0003713	transcription coactivator activity	P06748	IDA		Human	PMID:15087454
Molecular Function	GO:0003713	transcription coactivator activity	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Molecular Function	GO:0051082	unfolded protein binding	P06748	IDA		Human	PMID:10211837
Molecular Function	GO:0051082	unfolded protein binding	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Molecular Function	GO:0051082	unfolded protein binding	P16039	ISS	UniProtKB:P06748	Chicken	GO_REF:0000024
Cellular Component	GO:0005813	centrosome	Npm1	IDA		Mouse	MGI:MGI:3610707\|PMID:16297385
Cellular Component	GO:0005813	centrosome	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Cellular Component	GO:0005813	centrosome	P16039	ISS	UniProtKB:P06748	Chicken	GO_REF:0000024
Cellular Component	GO:0005737	cytoplasm	P06748	IDA		Human	PMID:9121481
Cellular Component	GO:0005737	cytoplasm	Npm1	IDA		Mouse	MGI:MGI:3625664\|PMID:16648475
Cellular Component	GO:0005737	cytoplasm	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Cellular Component	GO:0005737	cytoplasm	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Cellular Component	GO:0005737	cytoplasm	P16039	ISS	UniProtKB:P06748	Chicken	GO_REF:0000024
Cellular Component	GO:0005829	cytosol	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Cellular Component	GO:0001652	granular component	Npm1	IDA		Mouse	MGI:MGI:3511413\|PMID:15485902
Cellular Component	GO:0001652	granular component	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Cellular Component	GO:0015934	large ribosomal subunit	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Cellular Component	GO:0016607	nuclear speck	Npm1	IDA		Mouse	MGI:MGI:3615094\|PMID:16376875
Cellular Component	GO:0016607	nuclear speck	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Cellular Component	GO:0005730	nucleolus	P06748	IDA		Human	PMID:16041368
Cellular Component	GO:0005730	nucleolus	P06748	IDA		Human	PMID:12080348
Cellular Component	GO:0005730	nucleolus	P06748	IDA		Human	PMID:17475909
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:1891512\|PMID:10716735
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:3573985\|PMID:15596447
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:3608543\|PMID:16027046
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:3583493\|PMID:15989966
Cellular Component	GO:0005730	nucleolus	Npm1	ISO	UniProtKB:P06748	Mouse	MGI:MGI:2154458
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:3689171\|PMID:16855206
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:3625664\|PMID:16648475
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:3610707\|PMID:16297385
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:3522381\|PMID:15615785
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:3511413\|PMID:15485902
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:2446969\|PMID:12374805
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:80200\|PMID:2100262
Cellular Component	GO:0005730	nucleolus	Npm1	ISO	UniProtKB:P06748	Mouse	MGI:MGI:3696526\|PMID:17158916
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Cellular Component	GO:0005730	nucleolus	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Cellular Component	GO:0005730	nucleolus	Npm1	IDA		Rat	RGD:1566578\|PMID:12450141
Cellular Component	GO:0005730	nucleolus	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Cellular Component	GO:0005730	nucleolus	npm1	IDA		Zfish	ZFIN:ZDB-PUB-080515-6\|PMID:18469340
Cellular Component	GO:0005654	nucleoplasm	P06748	IDA		Human	PMID:12058066
Cellular Component	GO:0005654	nucleoplasm	Npm1	IDA		Mouse	MGI:MGI:3610707\|PMID:16297385
Cellular Component	GO:0005654	nucleoplasm	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Cellular Component	GO:0005654	nucleoplasm	Npm1	IDA		Mouse	MGI:MGI:2446969\|PMID:12374805
Cellular Component	GO:0005654	nucleoplasm	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Cellular Component	GO:0005654	nucleoplasm	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Cellular Component	GO:0005634	nucleus	P06748	IDA		Human	PMID:12080348
Cellular Component	GO:0005634	nucleus	Npm1	IDA		Mouse	MGI:MGI:3625664\|PMID:16648475
Cellular Component	GO:0005634	nucleus	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Cellular Component	GO:0005634	nucleus	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Cellular Component	GO:0005634	nucleus	P16039	ISS	UniProtKB:P06748	Chicken	GO_REF:0000024
Cellular Component	GO:0030529	ribonucleoprotein complex	Npm1	ISO	UniProtKB:P06748	Mouse	MGI:MGI:3822232\|PMID:18809582
Cellular Component	GO:0015935	small ribosomal subunit	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Cellular Component	GO:0031616	spindle pole centrosome	P06748	IDA		Human	PMID:16041368
Cellular Component	GO:0031616	spindle pole centrosome	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0007569	cell aging	P06748	IMP		Human	PMID:12080348
Biological Process	GO:0007569	cell aging	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0007569	cell aging	P16039	ISS	UniProtKB:P06748	Chicken	GO_REF:0000024
Biological Process	GO:0016049	cell growth	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0016049	cell growth	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Biological Process	GO:0006884	cell volume homeostasis	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0006884	cell volume homeostasis	Npm1	IMP		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0007098	centrosome cycle	P06748	IMP		Human	PMID:11051553
Biological Process	GO:0007098	centrosome cycle	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0007098	centrosome cycle	P16039	ISS	UniProtKB:P06748	Chicken	GO_REF:0000024
Biological Process	GO:0008285	negative regulation of cell proliferation	P06748	IMP		Human	PMID:12080348
Biological Process	GO:0008285	negative regulation of cell proliferation	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0008285	negative regulation of cell proliferation	P16039	ISS	UniProtKB:P06748	Chicken	GO_REF:0000024
Biological Process	GO:0010826	negative regulation of centrosome duplication	P06748	IMP		Human	PMID:16041368
Biological Process	GO:0010826	negative regulation of centrosome duplication	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0048025	negative regulation of nuclear mRNA splicing, via spliceosome	Npm1	IDA		Mouse	MGI:MGI:3615094\|PMID:16376875
Biological Process	GO:0048025	negative regulation of nuclear mRNA splicing, via spliceosome	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Biological Process	GO:0006913	nucleocytoplasmic transport	P06748	IDA		Human	PMID:16041368
Biological Process	GO:0006913	nucleocytoplasmic transport	Npm1	IDA		Mouse	MGI:MGI:3511413\|PMID:15485902
Biological Process	GO:0006913	nucleocytoplasmic transport	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Biological Process	GO:0006913	nucleocytoplasmic transport	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0006334	nucleosome assembly	P06748	IDA		Human	PMID:11602260
Biological Process	GO:0006334	nucleosome assembly	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0043085	positive regulation of catalytic activity	Npm1	IDA		Rat	RGD:1600909\|PMID:11481036
Biological Process	GO:0008284	positive regulation of cell proliferation	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0008284	positive regulation of cell proliferation	Npm1	IMP		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0031328	positive regulation of cellular biosynthetic process	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0031328	positive regulation of cellular biosynthetic process	Npm1	IMP		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0010825	positive regulation of centrosome duplication	Npm1	IGI	UniProtKB:Q28201	Mouse	MGI:MGI:3697024\|PMID:17015463
Biological Process	GO:0010825	positive regulation of centrosome duplication	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Biological Process	GO:0051054	positive regulation of DNA metabolic process	Npm1	IDA		Rat	RGD:1600909\|PMID:11481036
Biological Process	GO:0045740	positive regulation of DNA replication	Npm1	IDA		Rat	RGD:1600909\|PMID:11481036
Biological Process	GO:0051092	positive regulation of NF-kappaB transcription factor activity	P06748	IMP		Human	PMID:15087454
Biological Process	GO:0051092	positive regulation of NF-kappaB transcription factor activity	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0045860	positive regulation of protein kinase activity	Npm1	IDA		Mouse	MGI:MGI:3697024\|PMID:17015463
Biological Process	GO:0045860	positive regulation of protein kinase activity	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Biological Process	GO:0051260	protein homooligomerization	Npm1	IDA		Rat	RGD:1600911\|PMID:8611572
Biological Process	GO:0008104	protein localization	P06748	IDA		Human	PMID:18420587
Biological Process	GO:0008104	protein localization	Npm1	IMP	MGI:MGI:3604210	Mouse	MGI:MGI:3603875\|PMID:16199867
Biological Process	GO:0008104	protein localization	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Biological Process	GO:0008104	protein localization	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0051259	protein oligomerization	Npm1	ISO	UniProtKB:P06748	Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0045767	regulation of anti-apoptosis	Npm1	IMP		Rat	RGD:1600871\|PMID:15893727
Biological Process	GO:0051726	regulation of cell cycle	Npm1	IMP		Mouse	MGI:MGI:3511413\|PMID:15485902
Biological Process	GO:0051726	regulation of cell cycle	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Biological Process	GO:0010824	regulation of centrosome duplication	Npm1	IMP	MGI:MGI:3604807	Mouse	MGI:MGI:3604166\|PMID:16007073
Biological Process	GO:0010824	regulation of centrosome duplication	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Biological Process	GO:0043516	regulation of DNA damage response, signal transduction by p53 class mediator	Npm1	IGI	MGI:MGI:98834	Mouse	MGI:MGI:3603875\|PMID:16199867
Biological Process	GO:0043516	regulation of DNA damage response, signal transduction by p53 class mediator	Npm1	ISO	RGD:11000	Rat	RGD:1624291
Biological Process	GO:0006950	response to stress	P06748	IMP		Human	PMID:12080348
Biological Process	GO:0006950	response to stress	Npm1	ISO	RGD:735682	Rat	RGD:1624291
Biological Process	GO:0042273	ribosomal large subunit biogenesis	Npm1	IMP		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0042273	ribosomal large subunit biogenesis	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0000055	ribosomal large subunit export from nucleus	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0000055	ribosomal large subunit export from nucleus	Npm1	IMP		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0042274	ribosomal small subunit biogenesis	Npm1	IMP		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0042274	ribosomal small subunit biogenesis	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0000056	ribosomal small subunit export from nucleus	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0006407	rRNA export from nucleus	Npm1	IDA		Mouse	MGI:MGI:3822232\|PMID:18809582
Biological Process	GO:0006407	rRNA export from nucleus	Npm1	IMP		Mouse	MGI:MGI:3822232\|PMID:18809582

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IC Inferred by curator

IDA Inferred from direct assay

IEA Inferred from electronic annotation

IEP Inferred from expression pattern

IGC Inferred from genomic context

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

NAS Non-traceable Author Statement

ND No biological data available

RCA Reviewed computational analysis

TAS Traceable author statement

NR Not recorded (appears in some legacy annotations)