Compare GO annotations for ORTHOMCL1173 PPOD cluster

Possible outliers might be spotted in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.

Annotations are indicated by colored nodes: human, mouse, rat, chicken, zfish, fly, worm, dicty, dicot, yeast, pombe, ecoli.
Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Red arrows indicate "regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Chicken from GOA; Zfish from Zfin; Fly from Flybase; Worm from Wormbase; Dicot from TAIR; Dicty from Dictybase; Yeast from SGD; Pombe from Sanger; Ecoli from EcoliHub.
Organisms with experimental annotations are indicated: EXP, IC, IDA, IEP, IGI, IMP, IPI. In addition, ISS (ISA, ISM, ISO) annotations are so indicated.
Does not include evidence codes: IEA, IGC, NAS, ND, NR, RCA, TAS.
Graph is also available as SVG (requires viewer plug-in from Adobe)
Evidence codes are listed at the bottom of the page.
Graph generated Mon Mar 30 18:25:07 2009.

Compare annotations to GO categories for ORTHOMCL1173.

Entry indicates that ortholog exists for this gene.
Colored entries indicate experimental annotation.
Parentheses indicate ISS annotation only.

Category	ID	Term	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Molecular Function	GO:0005488	binding	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	(Pombe)	Ecoli
Molecular Function	GO:0003824	catalytic activity	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	(Worm)	(Dicty)	Dicot	Yeast	(Pombe)	Ecoli
Molecular Function	GO:0009055	electron carrier activity	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Cellular Component	GO:0005623	cell	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	(Worm)	(Dicty)	Dicot	Yeast	Pombe	Ecoli
Cellular Component	GO:0044464	cell part	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	(Worm)	(Dicty)	Dicot	Yeast	Pombe	Ecoli
Cellular Component	GO:0031975	envelope	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	(Worm)	(Dicty)	Dicot	Yeast	(Pombe)	Ecoli
Cellular Component	GO:0032991	macromolecular complex	Human	Mouse	Rat	Chicken	Zfish	(Fly)	Worm	(Dicty)	Dicot	Yeast	(Pombe)	Ecoli
Cellular Component	GO:0043226	organelle	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	(Worm)	(Dicty)	Dicot	Yeast	Pombe	Ecoli
Cellular Component	GO:0044422	organelle part	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	(Worm)	(Dicty)	Dicot	Yeast	(Pombe)	Ecoli
Biological Process	GO:0065007	biological regulation	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0009987	cellular process	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	(Worm)	(Dicty)	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0032502	developmental process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0040007	growth	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0040011	locomotion	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0008152	metabolic process	Human	Mouse	(Rat)	Chicken	Zfish	(Fly)	(Worm)	(Dicty)	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0032501	multicellular organismal process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0048518	positive regulation of biological process	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0050789	regulation of biological process	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0000003	reproduction	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0022414	reproductive process	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Biological Process	GO:0050896	response to stimulus	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli

Full set of experimental (and ISS) annotations for ORTHOMCL1173

Category	ID	Term	DB Object	Evidence	With_From	Organism	Reference
Molecular Function	GO:0005524	ATP binding	SDH1-1	IDA		Dicot	TAIR:Publication:501720283\|PMID:17137349
Molecular Function	GO:0009055	electron carrier activity	sdhA	IDA		Ecoli	PMID:12788489
Molecular Function	GO:0050660	FAD binding	SDH1	IMP		Yeast	SGD_REF:S000116451\|PMID:1939170
Molecular Function	GO:0050660	FAD binding	SDH1	IDA		Yeast	SGD_REF:S000125591\|PMID:18279395
Molecular Function	GO:0050660	FAD binding	sdh1	ISS	Pfam:PF00890	Pombe	PMID:17072883
Molecular Function	GO:0050660	FAD binding	sdhA	IPI		Ecoli	PMID:2659351
Molecular Function	GO:0016491	oxidoreductase activity	sdhA	ISS	InterPro:IPR003953	Dicty	dictyBase_REF:10155
Molecular Function	GO:0005515	protein binding	P31040	IPI	UniProtKB:Q16595	Human	PMID:15961414
Molecular Function	GO:0005515	protein binding	Sdha	ISO	RGD:733521	Rat	RGD:1624291
Molecular Function	GO:0005515	protein binding	sdhA	IPI	UniProtKB:P0AEC8	Ecoli	PMID:16606699
Molecular Function	GO:0005515	protein binding	sdhA	IPI	UniProtKB:P0AF26	Ecoli	PMID:16606699
Molecular Function	GO:0005515	protein binding	sdhA	IPI	UniProtKB:P18843	Ecoli	PMID:16606699
Molecular Function	GO:0005515	protein binding	sdhA	IPI	UniProtKB:P21189	Ecoli	PMID:16606699
Molecular Function	GO:0005515	protein binding	sdhA	IPI	UniProtKB:P25798	Ecoli	PMID:16606699
Molecular Function	GO:0005515	protein binding	sdhA	IPI	UniProtKB:P77467	Ecoli	PMID:16606699
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	Scs-fp	ISS	EMBL:AF095938	Fly	FB:FBrf0105495
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	Scs-fp	ISS	UniProtKB:P31040	Fly	FB:FBrf0159903
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	sdha-1	ISS	UniProtKB:P31040	Worm	PMID:7739664
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	sdhA	ISS	EC:1.3.5.1	Dicty	dictyBase_REF:10155
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	SDH1	IDA		Yeast	SGD_REF:S000128491\|PMID:13445213
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	SDH1	IMP		Yeast	SGD_REF:S000048361\|PMID:197391
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	SDH1	IGI	SGD:S000003581\|SGD:S000003964	Yeast	SGD_REF:S000086932\|PMID:16232921
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	SDH1	IMP		Yeast	SGD_REF:S000050086\|PMID:9730279
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	SDH1	IMP		Yeast	SGD_REF:S000086932\|PMID:16232921
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	YJL045W	ISS	SGD:S000001631	Yeast	SGD_REF:S000050086\|PMID:9730279
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	YJL045W	IMP		Yeast	SGD_REF:S000086932\|PMID:16232921
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	YJL045W	IGI	SGD:S000001631	Yeast	SGD_REF:S000086932\|PMID:16232921
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	YJL045W	IGI	SGD:S000001631	Yeast	SGD_REF:S000050086\|PMID:9730279
Molecular Function	GO:0008177	succinate dehydrogenase (ubiquinone) activity	sdh1	ISS	UniProtKB:Q00711	Pombe	PMID:17072883
Molecular Function	GO:0000104	succinate dehydrogenase activity	P31040	IMP		Human	PMID:7550341
Molecular Function	GO:0000104	succinate dehydrogenase activity	Sdha	ISO	RGD:733521	Rat	RGD:1624291
Cellular Component	GO:0005618	cell wall	SDH1-1	IDA		Dicot	TAIR:Publication:501718077\|PMID:16287169
Cellular Component	GO:0005743	mitochondrial inner membrane	P31040	EXP		Human	PMID:16143825
Cellular Component	GO:0005743	mitochondrial inner membrane	P31040	ISS	UniProtKB:Q8K2B3	Human	GO_REF:0000024
Cellular Component	GO:0005743	mitochondrial inner membrane	Sdha	IDA		Mouse	MGI:MGI:3590069\|PMID:12865426
Cellular Component	GO:0005743	mitochondrial inner membrane	Sdha	ISO	RGD:733521	Rat	RGD:1624291
Cellular Component	GO:0005743	mitochondrial inner membrane	Sdha	ISO	RGD:733522	Rat	RGD:1624291
Cellular Component	GO:0005743	mitochondrial inner membrane	sdha-1	ISS	UniProtKB:P31040	Worm	PMID:7739664
Cellular Component	GO:0031966	mitochondrial membrane	SDH1	IDA		Yeast	SGD_REF:S000116451\|PMID:1939170
Cellular Component	GO:0005749	mitochondrial respiratory chain complex II	Scs-fp	ISS	EMBL:AF095938	Fly	FB:FBrf0105495
Cellular Component	GO:0005749	mitochondrial respiratory chain complex II	Scs-fp	ISS	UniProtKB:P31040	Fly	FB:FBrf0159903
Cellular Component	GO:0005749	mitochondrial respiratory chain complex II	sdhA	ISS	SGD:S000001631	Dicty	dictyBase_REF:10155
Cellular Component	GO:0005749	mitochondrial respiratory chain complex II	SDH1	IDA		Yeast	SGD_REF:S000040536\|PMID:9822678
Cellular Component	GO:0005749	mitochondrial respiratory chain complex II	sdh1	ISS	UniProtKB:Q00711	Pombe	PMID:17072883
Cellular Component	GO:0005739	mitochondrion	P31040	IDA		Human	PMID:16826196
Cellular Component	GO:0005739	mitochondrion	P31040	IDA		Human	PMID:7550341
Cellular Component	GO:0005739	mitochondrion	Sdha	IDA		Mouse	MGI:MGI:2682130\|PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Sdha	IDA		Mouse	MGI:MGI:3629441\|PMID:16120479
Cellular Component	GO:0005739	mitochondrion	Sdha	ISO	RGD:733521	Rat	RGD:1624291
Cellular Component	GO:0005739	mitochondrion	Sdha	ISO	RGD:733522	Rat	RGD:1624291
Cellular Component	GO:0005739	mitochondrion	sdhA	ISS	UniProt:P31040	Dicty	dictyBase_REF:10155
Cellular Component	GO:0005739	mitochondrion	SDH1-1	IDA		Dicot	TAIR:Publication:501712789\|PMID:15276431
Cellular Component	GO:0005739	mitochondrion	SDH1-1	IDA		Dicot	TAIR:Publication:501720283\|PMID:17137349
Cellular Component	GO:0005739	mitochondrion	SDH1	IDA		Yeast	SGD_REF:S000116520\|PMID:2826438
Cellular Component	GO:0005739	mitochondrion	SDH1	IDA		Yeast	SGD_REF:S000117178\|PMID:16823961
Cellular Component	GO:0005739	mitochondrion	YJL045W	IDA		Yeast	SGD_REF:S000117178\|PMID:16823961
Cellular Component	GO:0005739	mitochondrion	YJL045W	IDA		Yeast	SGD_REF:S000075100\|PMID:14576278
Cellular Component	GO:0005739	mitochondrion	sdh1	IDA		Pombe	PMID:16823372
Biological Process	GO:0009060	aerobic respiration	sdhA	ISS	UniProt:P31040	Dicty	dictyBase_REF:10155
Biological Process	GO:0009060	aerobic respiration	sdhA	IEP		Ecoli	PMID:7783618
Biological Process	GO:0010171	body morphogenesis	sdha-1	IMP	WB:WBRNAi00008330\|WB:WBPhenotype:0000535	Worm	WB:WBPaper00005654\|PMID:12529635
Biological Process	GO:0045333	cellular respiration	SDH1	IGI	SGD:S000003581	Yeast	SGD_REF:S000050086\|PMID:9730279
Biological Process	GO:0045333	cellular respiration	SDH1	IMP		Yeast	SGD_REF:S000050086\|PMID:9730279
Biological Process	GO:0045333	cellular respiration	SDH1	IGI	SGD:S000003581\|SGD:S000003964	Yeast	SGD_REF:S000086932\|PMID:16232921
Biological Process	GO:0045333	cellular respiration	SDH1	IMP		Yeast	SGD_REF:S000086932\|PMID:16232921
Biological Process	GO:0045333	cellular respiration	YJL045W	IMP		Yeast	SGD_REF:S000086932\|PMID:16232921
Biological Process	GO:0045333	cellular respiration	YJL045W	IGI	SGD:S000001631	Yeast	SGD_REF:S000050086\|PMID:9730279
Biological Process	GO:0045333	cellular respiration	YJL045W	IGI	SGD:S000001631	Yeast	SGD_REF:S000086932\|PMID:16232921
Biological Process	GO:0009792	embryonic development ending in birth or egg hatching	sdha-2	IMP	WB:WBRNAi00008099\|WB:WBPhenotype:0000050	Worm	WB:WBPaper00005599\|PMID:12445391
Biological Process	GO:0009792	embryonic development ending in birth or egg hatching	sdha-1	IMP	WB:WBRNAi00039533\|WB:WBPhenotype:0000050	Worm	WB:WBPaper00025054\|PMID:15791247
Biological Process	GO:0040007	growth	sdha-2	IMP	WB:WBRNAi00008099\|WB:WBPhenotype:0000059	Worm	WB:WBPaper00005599\|PMID:12445391
Biological Process	GO:0006121	mitochondrial electron transport, succinate to ubiquinone	sdhA	ISS	SGD:S000001631	Dicty	dictyBase_REF:10155
Biological Process	GO:0006121	mitochondrial electron transport, succinate to ubiquinone	SDH1	IDA		Yeast	SGD_REF:S000116520\|PMID:2826438
Biological Process	GO:0006121	mitochondrial electron transport, succinate to ubiquinone	sdh1	ISS	UniProtKB:Q00711	Pombe	PMID:17072883
Biological Process	GO:0002119	nematode larval development	sdha-2	IMP	WB:WBRNAi00008099\|WB:WBPhenotype:0000059	Worm	WB:WBPaper00005599\|PMID:12445391
Biological Process	GO:0007399	nervous system development	P31040	IMP		Human	PMID:16361598
Biological Process	GO:0007399	nervous system development	Sdha	ISO	RGD:733521	Rat	RGD:1624291
Biological Process	GO:0018991	oviposition	sdha-2	IMP	WB:WBRNAi00024725\|WB:WBPhenotype:0000640	Worm	WB:WBPaper00006395\|PMID:14551910
Biological Process	GO:0046956	positive phototaxis	sdhA	IMP		Dicty	dictyBase_REF:11651\|PMID:17725968
Biological Process	GO:0040010	positive regulation of growth rate	sdha-1	IMP	WB:WBRNAi00024459\|WB:WBPhenotype:0000031	Worm	WB:WBPaper00006395\|PMID:14551910
Biological Process	GO:0022904	respiratory electron transport chain	P31040	IDA		Human	PMID:7550341
Biological Process	GO:0022904	respiratory electron transport chain	Sdha	ISO	RGD:733521	Rat	RGD:1624291
Biological Process	GO:0006105	succinate metabolic process	P31040	IDA		Human	PMID:7550341
Biological Process	GO:0006105	succinate metabolic process	Sdha	ISO	RGD:733521	Rat	RGD:1624291
Biological Process	GO:0006105	succinate metabolic process	sdh1	IC	GO:0008177	Pombe	PMID:17072883
Biological Process	GO:0006099	tricarboxylic acid cycle	Scs-fp	ISS	UniProtKB:P31040	Fly	FB:FBrf0159903
Biological Process	GO:0006099	tricarboxylic acid cycle	sdha-1	ISS	UniProtKB:P31040	Worm	PMID:7739664
Biological Process	GO:0006099	tricarboxylic acid cycle	sdhA	ISS	UniProt:P31040	Dicty	dictyBase_REF:10155
Biological Process	GO:0006099	tricarboxylic acid cycle	SDH1	IC	GO:0008177	Yeast	SGD_REF:S000128491\|PMID:13445213
Biological Process	GO:0006099	tricarboxylic acid cycle	sdh1	ISS	UniProtKB:Q00711	Pombe	PMID:17072883
Biological Process	GO:0006099	tricarboxylic acid cycle	sdhA	IDA		Ecoli	PMID:13152052

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IC Inferred by curator

IDA Inferred from direct assay

IEA Inferred from electronic annotation

IEP Inferred from expression pattern

IGC Inferred from genomic context

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

NAS Non-traceable Author Statement

ND No biological data available

RCA Reviewed computational analysis

TAS Traceable author statement

NR Not recorded (appears in some legacy annotations)